fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G13260 EDF4, RAV1 ETHYLENE RESPONSE DNA BINDING FACTOR 4, related to ABI3/VP1 1 (.1)

>AT1G13260.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 826
EcoRI G|AATTC 384
HindIII A|AGCTT 166
HpaI GTT|AAC 498, 697, 919
SacI GAGCT|C 221


Click here to view TAIR data

>AT1G13260.1 length:1035
ATGGAATCGA GTAGCGTTGA TGAGAGTACT ACAAGTACAG GTTCCATCTG 
50
TGAAACCCCG GCGATAACTC CGGCGAAAAA GTCGTCGGTA GGTAACTTAT 
100
ACAGGATGGG AAGCGGATCA AGCGTTGTGT TAGATTCAGA GAACGGCGTA 
150
GAAGCTGAAT CTAGGAAGCT TCCGTCGTCA AAATACAAAG GTGTGGTGCC 
200
ACAACCAAAC GGAAGATGGG GAGCTCAGAT TTACGAGAAA CACCAGCGCG 
250
TGTGGCTCGG GACATTCAAC GAAGAAGACG AAGCCGCTCG TGCCTACGAC 
300
GTCGCGGTTC ACAGGTTCCG TCGCCGTGAC GCCGTCACAA ATTTCAAAGA 
350
CGTGAAGATG GACGAAGACG AGGTCGATTT CTTGAATTCT CATTCGAAAT 
400
CTGAGATCGT TGATATGTTG AGGAAACATA CTTATAACGA AGAGTTAGAG 
450
CAGAGTAAAC GGCGTCGTAA TGGTAACGGA AACATGACTA GGACGTTGTT 
500
AACGTCGGGG TTGAGTAATG ATGGTGTTTC TACGACGGGG TTTAGATCGG 
550
CGGAGGCACT GTTTGAGAAA GCGGTAACGC CAAGCGACGT TGGGAAGCTA 
600
AACCGTTTGG TTATACCGAA ACATCACGCA GAGAAACATT TTCCGTTACC 
650
GTCAAGTAAC GTTTCCGTGA AAGGAGTGTT GTTGAACTTT GAGGACGTTA 
700
ACGGGAAAGT GTGGAGGTTC CGTTACTCGT ATTGGAACAG TAGTCAGAGT 
750
TATGTTTTGA CTAAAGGTTG GAGCAGGTTC GTTAAGGAGA AGAATCTACG 
800
TGCTGGTGAC GTGGTTAGTT TCAGTAGATC TAACGGTCAG GATCAACAGT 
850
TGTACATTGG GTGGAAGTCG AGATCCGGGT CAGATTTAGA TGCGGGTCGG 
900
GTTTTGAGAT TGTTCGGAGT TAACATTTCA CCGGAGAGTT CAAGAAACGA 
950
CGTCGTAGGA AACAAAAGAG TGAACGATAC TGAGATGTTA TCGTTGGTGT 
1000
GTAGCAAGAA GCAACGCATC TTTCACGCCT CGTAA
1050

>AT1G13260.1 longest ORF length:344
MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV 
50
EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD 
100
VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE 
150
QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL 
200
NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS 
250
YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR 
300
VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
350