|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G14580 | C2H2-like zinc finger protein (.1.2) |
>AT1G14580.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRI | G|AATTC | 1017 |
| HindIII | A|AGCTT | 1397 |
| KpnI | GGTAC|C | 541, 568 |
| NcoI | C|CATGG | 113, 319 |
| NdeI | CA|TATG | 1388 |
| PstI | CTGCA|G | 289, 785 |
| PvuII | CAG|CTG | 674 |
| StyI | C|C[AT][AT]GG | 113, 319, 897 |
Click here to view TAIR data
>AT1G14580.1 length:1404
ATGTCTTCAT CGTACAACAC AATTGCTTTG TCCTCCACTC CGACCTTCCT | 50 |
CCTCTCAAGT GCCGCTGCCG GACCCGGACC AAACAACTTT AACCGTCAAG | 100 |
AGGCTGCGAT GACCATGGTT CAACAACAAC CCACTTCCTC CGTTGCTCCA | 150 |
CCACCCAAGA AGCGAAGGAA CCAACCCGGA AACCCAAATC CAGATGCTGA | 200 |
AGTGATAGCG TTATCGCCAA AGACGATAAT GGCGACGAAC AGGTTCCTAT | 250 |
GTGAAGTGTG CAACAAAGGG TTCCAGAGGG AACAGAATCT GCAGCTCCAC | 300 |
AGGAGGGGAC ACAACCTTCC ATGGAAGCTG AAACAAAAGT CCAACAAAGA | 350 |
GGTGAGGAGG AAGGTGTACC TTTGTCCGGA GCCCTCGTGC GTCCACCATG | 400 |
ACCCCGCACG TGCTCTCGGA GACCTCACCG GAATCAAGAA GCATTACTAT | 450 |
CGGAAGCACG GTGAGAAAAA GTGGAAGTGC GATAAGTGCT CTAAGCGTTA | 500 |
CGCTGTTCAA TCTGATTGGA AAGCTCACTC TAAGACCTGT GGTACCAAAG | 550 |
AGTATCGATG TGACTGTGGT ACCATCTTCT CTAGGAGAGA CAGTTACATC | 600 |
ACCCACAGGG CATTCTGTGA TGCACTCATA CAGGAGTCAG CAAGAAACCC | 650 |
CACCGTGAGC TTCACGGCAA TGGCAGCTGG TGGTGGTGGT GGCGCCAGAC | 700 |
ATGGCTTTTA CGGCGGAGCT TCTTCCGCTC TCTCTCACAA CCATTTCGGT | 750 |
AACAATCCAA ATTCCGGTTT CACCCCTCTA GCTGCTGCAG GCTACAATCT | 800 |
GAACCGTTCA TCTTCCGACA AGTTCGAAGA CTTCGTTCCT CAGGCCACCA | 850 |
ACCCTAATCC CGGTCCGACC AACTTCCTCA TGCAATGCTC TCCGAACCAA | 900 |
GGACTGTTAG CCCAGAACAA TCAGAGTCTC ATGAACCATC ATGGTCTGAT | 950 |
CAGCCTCGGT GATAACAACA ACAACAACCA CAACTTTTTC AACCTCGCAT | 1000 |
ACTTTCAAGA CACCAAGAAT TCTGATCAGA CAGGTGTTCC TTCTCTGTTC | 1050 |
ACCAATGGTG CTGATAACAA CGGCCCATCT GCTTTGCTTA GAGGGCTAAC | 1100 |
TTCTTCATCT TCGTCAAGTG TGGTCGTTAA TGACTTTGGA GATTGTGATC | 1150 |
ATGGAAACCT TCAAGGACTC ATGAACTCTC TAGCTGCGAC AACAGATCAA | 1200 |
CAAGGCCGGT CCCCTAGCCT TTTCGACCTT CATTTCGCAA ACAATCTTAG | 1250 |
CATGGGTGGC TCGGATAGGT TGACTTTGGA CTTTCTTGGT GTTAATGGAG | 1300 |
GAATTGTGAG CACCGTCAAT GGCCGTGGTG GTCGTAGTGG TGGACCTCCT | 1350 |
CTGGATGCTG AGATGAAGTT TTCACACCCA AATCATCCAT ATGGCAAAGC | 1400 |
TTGA | 1450 |
>AT1G14580.1 longest ORF length:467
MSSSYNTIAL SSTPTFLLSS AAAGPGPNNF NRQEAAMTMV QQQPTSSVAP | 50 |
PPKKRRNQPG NPNPDAEVIA LSPKTIMATN RFLCEVCNKG FQREQNLQLH | 100 |
RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY | 150 |
RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI | 200 |
THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG | 250 |
NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ | 300 |
GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF | 350 |
TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ | 400 |
QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP | 450 |
LDAEMKFSHP NHPYGKA | 500 |