fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G14685 BBR/BPC2, ATBPC2, BPC2 basic pentacysteine 2 (.1.2.3)

>AT1G14685.2 CDS map

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Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BanI, BbsI, BbvI, BcgI, BciVI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HindIII, HpaI, HphI, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MwoI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, RsrII, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XbaI, XcmI, XmaI, XmnI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 84
AccII(FnuDII) CG|CG 721
AciI C|CGC 498
AflII C|TTAAG 787
AluI AG|CT 40, 75, 188, 400, 583
AlwNI CAGNNN|CTG 44
AvaI C|PyCGPuG 488, 699
BamHI G|GATCC 126
BanII GPuGCPy|C 584
BbvCI CC|TCAGC 590
BclI T|GATCA 524
BsaBI GATNN|NNATC 131
BsaJI C|CNNGG 118, 332, 430, 684
BsaWI [AT]|CCGG[AT] 342
BsiHKAI G[AT]GC[AT]|C 584
BslI CCNNNNN|NNGG 94, 212, 261
BsoBI C|PyCGPuG 488, 699
Bsp1286I G[GAT]GC[CAT]|C 584
BsrDI GCAATGNN| 596
BsrI ACTGGN| 580
BssKI |CCNGG 117
BstF5I GGATGNN| 4, 445, 611
BstNI CC|[AT]GG 117
BstUI CG|CG 721
BstYI Pu|GATCPy 126, 695
BtgI C|CPuPyGG 684
Cac8I GCN|NGC 403
DdeI C|TNAG 376, 421, 502, 589
DpnI GA-CH3|TC 92, 125, 523, 694, 782
DpnII |GATC 92, 125, 523, 694, 782
DraI TTT|AAA 55
EcoO109I PuG|GNCCPy 145
Fnu4HI GC|NGC 42, 74
HaeIII GG|CC 144
HhaI GCG|C 720
HinP1I G|CGC 720
HincII GTPy|PuAC 514
HinfI G|ANTC 131, 308, 338, 410, 713, 773
HpaII C|CGG 341
Hpy188I TCN|GA 95, 128, 371, 753, 776, 832
Hpy99I CG[AT]CG| 295
HpyCH4III ACN|GT 107, 262, 451, 601
HpyCH4V TG|CA 72, 300, 394, 569, 575, 654
MboI |GATC 92, 125, 523, 694, 782
MfeI C|AATTG 195
MseI T|TAA 54, 201, 345, 492, 726, 762, 786
MslI CAPyNN|NNPuTG 652
MspA1I C[AC]G|C[GT]G 41
MspI C|CGG 341
N.BstNBI GAGTCNNNN|N 718
NlaIII CATG| 184, 806
NlaIV GGN|NCC 126, 144
NsiI ATGCA|T 655
PaeR7I C|TCGAG 488
PspGI |CC[AT]GG 117
PvuII CAG|CTG 41
RsaI GT|AC 636, 672
SacI GAGCT|C 584
Sau3AI |GATC 92, 125, 523, 694, 782
Sau96I G|GNCC 144
ScaI AGT|ACT 673
ScrFI CC|NGG 117
SmlI C|TPyPuAG 488, 739, 787
StyI C|C[AT][AT]GG 430
Taqƒ¿I T|CGA 296, 407, 487
TfiI G|A[AT]TC 131, 308, 338, 773
TliI C|TCGAG 488
TseI G|C[AT]GC 42, 74
Tsp45I |GT[CG]AC 825
Tsp509I |AATT 20, 194
TspRI NNCA[CG]TGNN| 580
XhoI C|TCGAG 488


Click here to view TAIR data

>AT1G14685.2 length:840
ATGGATGACG ATGGGTTTCG TAATTGGGGT TACTATGAAC CAGCTGCTGC 
50
TACCTTTAAA GGTAATCTCG GTTTGCAGCT AATGTCTACC ATTGATCGGA 
100
ACACTAAACC GTTTTTACCT GGGCGGGATC CGAATCTAAT GATGGGGCCT 
150
AACGGGTCAT ATCACCACCA AGAGCCTCCT ATCCACATGA GCTACAATTG 
200
GATTAACCAA CAGAAGGATA AGTTCTTCAA TATGTTGCCT GTTACAACAG 
250
CCACTCCTAA CTACGGTAAT GTCCTTCCCG AAACTTCGTC TGCTCCGTCG 
300
ATGCAGATGA ATCTCCATCA TCATCTTCAA ACCGAGGAGA ATCCGGTTAA 
350
GTTGGAAGAA GAGATTGTTG TTCAGACTAA GAAGAGAAAG ACCAATGCAA 
400
AAGCTGGCTC GACTCCAAAG GCTAAGAAGC CAAGGAAACC AAAGGATGAG 
450
AACAGTAACA ACAACAACAA CAACAACACG AATGTTACTC GAGTTAAACC 
500
CGCTAAGAAA AGTGTTGACT TGGTGATCAA TGGAGTGAGT ATGGACATTT 
550
CGGGTCTTCC TGTTCCTATC TGCACTTGCA CTGGAGCTCC TCAGCAATGC 
600
TACCGTTGGG GATGTGGCGG TTGGCAGTCT GCTTGTTGTA CCACAAACAT 
650
CTCAATGCAT CCATTACCAA TGAGTACTAA ACGCCGTGGA GCGAGGATCT 
700
CGGGAAGGAA GATGAGTCAA GGCGCGTTTA AGAAGGTTCT TGAGAAACTT 
750
GCTTCTGATG GGTTTAACTT TGGGAATCCG ATTGATCTTA AGAGCCATTG 
800
GGCAAGACAT GGAACTAACA AGTTCGTCAC AATCAGATGA 
850

>AT1G14685.2 longest ORF length:279
MDDDGFRNWG YYEPAAATFK GNLGLQLMST IDRNTKPFLP GRDPNLMMGP 
50
NGSYHHQEPP IHMSYNWINQ QKDKFFNMLP VTTATPNYGN VLPETSSAPS 
100
MQMNLHHHLQ TEENPVKLEE EIVVQTKKRK TNAKAGSTPK AKKPRKPKDE 
150
NSNNNNNNNT NVTRVKPAKK SVDLVINGVS MDISGLPVPI CTCTGAPQQC 
200
YRWGCGGWQS ACCTTNISMH PLPMSTKRRG ARISGRKMSQ GAFKKVLEKL 
250
ASDGFNFGNP IDLKSHWARH GTNKFVTIR
300