fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G14920 RGA2, GAI RESTORATION ON GROWTH ON AMMONIA 2, GIBBERELLIC ACID INSENSITIVE, GRAS family transcription factor family protein (.1)

>AT1G14920.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 1340
HindIII A|AGCTT 788
HpaI GTT|AAC 906, 1093
StyI C|C[AT][AT]GG 369
XhoI C|TCGAG 148


Click here to view TAIR data

>AT1G14920.1 length:1602
ATGAAGAGAG ATCATCATCA TCATCATCAT CAAGATAAGA AGACTATGAT 
50
GATGAATGAA GAAGACGACG GTAACGGCAT GGATGAGCTT CTAGCTGTTC 
100
TTGGTTACAA GGTTAGGTCA TCCGAAATGG CTGATGTTGC TCAGAAACTC 
150
GAGCAGCTTG AAGTTATGAT GTCTAATGTT CAAGAAGACG ATCTTTCTCA 
200
ACTCGCTACT GAGACTGTTC ACTATAATCC GGCGGAGCTT TACACGTGGC 
250
TTGATTCTAT GCTCACCGAC CTTAATCCTC CGTCGTCTAA CGCCGAGTAC 
300
GATCTTAAAG CTATTCCCGG TGACGCGATT CTCAATCAGT TCGCTATCGA 
350
TTCGGCTTCT TCGTCTAACC AAGGCGGCGG AGGAGATACG TATACTACAA 
400
ACAAGCGGTT GAAATGCTCA AACGGCGTCG TGGAAACCAC TACAGCGACG 
450
GCTGAGTCAA CTCGGCATGT TGTCCTGGTT GACTCGCAGG AGAACGGTGT 
500
GCGTCTCGTT CACGCGCTTT TGGCTTGCGC TGAAGCTGTT CAGAAAGAGA 
550
ATCTGACTGT AGCGGAAGCT CTGGTGAAGC AAATCGGATT CTTAGCCGTT 
600
TCTCAAATCG GAGCGATGAG AAAAGTCGCT ACTTACTTCG CCGAAGCTCT 
650
CGCGCGGCGG ATTTACCGTC TCTCTCCGTC GCAGAGTCCA ATCGACCACT 
700
CTCTCTCCGA TACTCTTCAG ATGCACTTCT ACGAGACTTG TCCTTATCTC 
750
AAGTTCGCTC ACTTCACGGC GAATCAAGCG ATTCTCGAAG CTTTTCAAGG 
800
GAAGAAAAGA GTTCATGTCA TTGATTTCTC TATGAGTCAA GGTCTTCAAT 
850
GGCCGGCGCT TATGCAGGCT CTTGCGCTTC GACCTGGTGG TCCTCCTGTT 
900
TTCCGGTTAA CCGGAATTGG TCCACCGGCA CCGGATAATT TCGATTATCT 
950
TCATGAAGTT GGGTGTAAGC TGGCTCATTT AGCTGAGGCG ATTCACGTTG 
1000
AGTTTGAGTA CAGAGGATTT GTGGCTAACA CTTTAGCTGA TCTTGATGCT 
1050
TCGATGCTTG AGCTTAGACC AAGTGAGATT GAATCTGTTG CGGTTAACTC 
1100
TGTTTTCGAG CTTCACAAGC TCTTGGGACG ACCTGGTGCG ATCGATAAGG 
1150
TTCTTGGTGT GGTGAATCAG ATTAAACCGG AGATTTTCAC TGTGGTTGAG 
1200
CAGGAATCGA ACCATAATAG TCCGATTTTC TTAGATCGGT TTACTGAGTC 
1250
GTTGCATTAT TACTCGACGT TGTTTGACTC GTTGGAAGGT GTACCGAGTG 
1300
GTCAAGACAA GGTCATGTCG GAGGTTTACT TGGGTAAACA GATCTGCAAC 
1350
GTTGTGGCTT GTGATGGACC TGACCGAGTT GAGCGTCATG AAACGTTGAG 
1400
TCAGTGGAGG AACCGGTTCG GGTCTGCTGG GTTTGCGGCT GCACATATTG 
1450
GTTCGAATGC GTTTAAGCAA GCGAGTATGC TTTTGGCTCT GTTCAACGGC 
1500
GGTGAGGGTT ATCGGGTGGA GGAGAGTGAC GGCTGTCTCA TGTTGGGTTG 
1550
GCACACACGA CCGCTCATAG CCACCTCGGC TTGGAAACTC TCCACCAATT 
1600
AG
1650

>AT1G14920.1 longest ORF length:533
MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL 
50
EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY 
100
DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT 
150
AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV 
200
SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL 
250
KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV 
300
FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA 
350
SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE 
400
QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN 
450
VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG 
500
GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
550