fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G15050 IAA34 indole-3-acetic acid inducible 34 (.1)

>AT1G15050.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
NcoI C|CATGG 293, 484
StyI C|C[AT][AT]GG 293, 484
XhoI C|TCGAG 367


Click here to view TAIR data

>AT1G15050.1 length:558
ATGTATTGCA GCGATCCTCC CCATCCCTTG CACTTAGTGG CATCAGACAA 
50
ACAACAAAAA GACCACAAAC TGATCCTTTC CTGGAAGAAA CCAACAATGG 
100
ACTCAGACCC ACTCGGTGTT TTCCCAAATT CTCCCAAGTA TCATCCATAT 
150
TACTCGCAGA CCACGGAGTT TGGTGGCGTA ATCGATTTAG GTCTCAGCCT 
200
GAGAACCATA CAACATGAGA TTTACCACTC ATCTGGCCAA AGATATTGTA 
250
GTAATGAAGG ATACAGACGG AAGTGGGGTT ATGTAAAGGT CACCATGGAT 
300
GGTTTGGTGG TAGGTCGCAA GGTCTGTGTT CTTGATCATG GAAGCTATTC 
350
AACTCTTGCT CATCAACTCG AGGACATGTT TGGGATGCAG AGTGTGTCGG 
400
GATTGAGGTT GTTCCAGATG GAGTCTGAGT TCTGTTTGGT CTACAGAGAC 
450
GAAGAAGGTC TGTGGAGAAA TGCTGGGGAT GTTCCATGGA ATGAGTTCAT 
500
AGAAAGCGTG GAGCGGCTGA GAATCACAAG AAGAAACGAT GCTGTACTTC 
550
CCTTTTAA
600

>AT1G15050.1 longest ORF length:185
MYCSDPPHPL HLVASDKQQK DHKLILSWKK PTMDSDPLGV FPNSPKYHPY 
50
YSQTTEFGGV IDLGLSLRTI QHEIYHSSGQ RYCSNEGYRR KWGYVKVTMD 
100
GLVVGRKVCV LDHGSYSTLA HQLEDMFGMQ SVSGLRLFQM ESEFCLVYRD 
150
EEGLWRNAGD VPWNEFIESV ERLRITRRND AVLPF
200