|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G15580 | ATAUX2-27, IAA5 | AUXIN-INDUCIBLE 2-27, indole-3-acetic acid inducible 5 (.1) |
>AT1G15580.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 297 |
| EcoRV | GAT|ATC | 64 |
| StyI | C|C[AT][AT]GG | 424, 438 |
Click here to view TAIR data
>AT1G15580.1 length:492
ATGGCGAATG AGAGTAATAA TCTTGGACTC GAAATCACCG AACTACGGCT | 50 |
AGGTCTTCCC GGAGATATCG TCGTCTCCGG TGAGTCCATC TCCGGGAAGA | 100 |
AGAGGGCTTC TCCGGAAGTA GAGATTGATT TGAAATGTGA ACCGGCGAAA | 150 |
AAGAGTCAAG TTGTGGGTTG GCCACCGGTT TGTTCGTACC GGAGAAAGAA | 200 |
CAGTCTCGAA CGGACCAAAA GTTCGTACGT GAAAGTGAGT GTAGATGGAG | 250 |
CTGCATTTTT AAGGAAGATT GATTTGGAAA TGTACAAATG TTACCAAGAT | 300 |
CTTGCTTCCG CTCTGCAAAT TCTGTTCGGA TGCTATATCA ATTTTGATGA | 350 |
TACGTTGAAG GAAAGTGAAT GTGTACCAAT ATATGAAGAC AAAGATGGAG | 400 |
ATTGGATGCT TGCTGGAGAT GTTCCTTGGG AAATGTTCCT TGGATCGTGC | 450 |
AAGAGGTTAA GGATTATGAA GAGATCATGT AACAGAGGAT GA | 500 |
>AT1G15580.1 longest ORF length:163
MANESNNLGL EITELRLGLP GDIVVSGESI SGKKRASPEV EIDLKCEPAK | 50 |
KSQVVGWPPV CSYRRKNSLE RTKSSYVKVS VDGAAFLRKI DLEMYKCYQD | 100 |
LASALQILFG CYINFDDTLK ESECVPIYED KDGDWMLAGD VPWEMFLGSC | 150 |
KRLRIMKRSC NRG | 200 |