fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G16060 ADAP ARIA-interacting double AP2 domain protein (.1.2)

>AT1G16060.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 604, 913
HpaI GTT|AAC 951
NdeI CA|TATG 287
StyI C|C[AT][AT]GG 561
XhoI C|TCGAG 715


Click here to view TAIR data

>AT1G16060.1 length:1038
ATGTTCATCG CCGTCGAAGT TTCTCCGGTA ATGGAAGACA TCACACGGCA 
50
GAGCAAAAAA ACTTCGGTTG AGAATGAAAC CGGCGATGAT CAGTCAGCAA 
100
CATCAGTAGT CCTTAAAGCT AAACGCAAAC GCCGATCGCA ACCACGAGAC 
150
GCTCCACCCC AACGTAGCTC CGTCCATAGA GGCGTCACAA GGCATCGATG 
200
GACTGGAAGG TACGAAGCAC ATTTGTGGGA TAAGAATAGT TGGAACGAAA 
250
CTCAGACCAA GAAAGGAAGA CAAGTATATT TAGGGGCATA TGACGAGGAA 
300
GATGCAGCAG CACGTGCCTA CGACTTAGCA GCATTGAAAT ATTGGGGACG 
350
AGACACCATC TTGAACTTCC CTTTGTGTAA TTATGAAGAA GACATCAAAG 
400
AAATGGAAAG CCAGTCAAAG GAAGAGTATA TTGGATCTTT GAGAAGAAAA 
450
AGTAGTGGGT TTTCACGAGG TGTATCAAAA TACAGAGGCG TTGCAAAGCA 
500
TCACCACAAT GGGAGATGGG AAGCTCGAAT CGGAAGAGTG TTTGGCAATA 
550
AATATTTATA CCTTGGAACT TACGCGACGC AAGAAGAAGC AGCTATAGCG 
600
TACGATATCG CAGCTATCGA GTACCGTGGA CTCAACGCCG TTACTAACTT 
650
CGACATCAGC CGTTATCTGA AACTCCCGGT GCCGGAGAAC CCTATCGATA 
700
CCGCGAATAA TCTCCTCGAG AGTCCGCATT CTGATCTTAG CCCATTTATA 
750
AAACCTAACC ACGAGTCTGA CTTATCACAG AGTCAATCTT CGTCAGAGGA 
800
CAACGATGAT CGGAAAACAA AGCTCTTGAA GTCGTCACCT TTAGTGGCAG 
850
AGGAGGTAAT CGGACCATCG ACGCCACCTG AGATTGCTCC GCCTCGTCGG 
900
AGCTTCCCGG AAGATATCCA GACGTATTTC GGGTGTCAAA ACTCCGGCAA 
950
GTTAACGGCG GAGGAAGATG ATGTTATCTT CGGTGATTTA GATTCTTTCC 
1000
TTACGCCTGA TTTCTACAGC GAGTTAAATG ATTGCTAA
1050

>AT1G16060.1 longest ORF length:345
MFIAVEVSPV MEDITRQSKK TSVENETGDD QSATSVVLKA KRKRRSQPRD 
50
APPQRSSVHR GVTRHRWTGR YEAHLWDKNS WNETQTKKGR QVYLGAYDEE 
100
DAAARAYDLA ALKYWGRDTI LNFPLCNYEE DIKEMESQSK EEYIGSLRRK 
150
SSGFSRGVSK YRGVAKHHHN GRWEARIGRV FGNKYLYLGT YATQEEAAIA 
200
YDIAAIEYRG LNAVTNFDIS RYLKLPVPEN PIDTANNLLE SPHSDLSPFI 
250
KPNHESDLSQ SQSSSEDNDD RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR 
300
SFPEDIQTYF GCQNSGKLTA EEDDVIFGDL DSFLTPDFYS ELNDC
350