fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G16060 ADAP ARIA-interacting double AP2 domain protein (.1.2)

>AT1G16060.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 394, 703
HpaI GTT|AAC 741
NdeI CA|TATG 77
StyI C|C[AT][AT]GG 351
XhoI C|TCGAG 505


Click here to view TAIR data

>AT1G16060.2 length:828
ATGTTTTTTT TTTTGGTTTT GCTGACGATG CTGACCGGAA TAATGGCTGA 
50
CTCATCACGT GCAGTATATT TAGGGGCATA TGACGAGGAA GATGCAGCAG 
100
CACGTGCCTA CGACTTAGCA GCATTGAAAT ATTGGGGACG AGACACCATC 
150
TTGAACTTCC CTTTGTGTAA TTATGAAGAA GACATCAAAG AAATGGAAAG 
200
CCAGTCAAAG GAAGAGTATA TTGGATCTTT GAGAAGAAAA AGTAGTGGGT 
250
TTTCACGAGG TGTATCAAAA TACAGAGGCG TTGCAAAGCA TCACCACAAT 
300
GGGAGATGGG AAGCTCGAAT CGGAAGAGTG TTTGGCAATA AATATTTATA 
350
CCTTGGAACT TACGCGACGC AAGAAGAAGC AGCTATAGCG TACGATATCG 
400
CAGCTATCGA GTACCGTGGA CTCAACGCCG TTACTAACTT CGACATCAGC 
450
CGTTATCTGA AACTCCCGGT GCCGGAGAAC CCTATCGATA CCGCGAATAA 
500
TCTCCTCGAG AGTCCGCATT CTGATCTTAG CCCATTTATA AAACCTAACC 
550
ACGAGTCTGA CTTATCACAG AGTCAATCTT CGTCAGAGGA CAACGATGAT 
600
CGGAAAACAA AGCTCTTGAA GTCGTCACCT TTAGTGGCAG AGGAGGTAAT 
650
CGGACCATCG ACGCCACCTG AGATTGCTCC GCCTCGTCGG AGCTTCCCGG 
700
AAGATATCCA GACGTATTTC GGGTGTCAAA ACTCCGGCAA GTTAACGGCG 
750
GAGGAAGATG ATGTTATCTT CGGTGATTTA GATTCTTTCC TTACGCCTGA 
800
TTTCTACAGC GAGTTAAATG ATTGCTAA
850

>AT1G16060.2 longest ORF length:275
MFFFLVLLTM LTGIMADSSR AVYLGAYDEE DAAARAYDLA ALKYWGRDTI 
50
LNFPLCNYEE DIKEMESQSK EEYIGSLRRK SSGFSRGVSK YRGVAKHHHN 
100
GRWEARIGRV FGNKYLYLGT YATQEEAAIA YDIAAIEYRG LNAVTNFDIS 
150
RYLKLPVPEN PIDTANNLLE SPHSDLSPFI KPNHESDLSQ SQSSSEDNDD 
200
RKTKLLKSSP LVAEEVIGPS TPPEIAPPRR SFPEDIQTYF GCQNSGKLTA 
250
EEDDVIFGDL DSFLTPDFYS ELNDC
300