fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G16490 ATMYB58 myb domain protein 58 (.1)

>AT1G16490.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 118
NcoI C|CATGG 52
SacI GAGCT|C 354, 653, 808
StyI C|C[AT][AT]GG 52


Click here to view TAIR data

>AT1G16490.1 length:825
ATGGGCAAAG GAAGAGCACC ATGTTGTGAC AAAACCAAAG TGAAGAGAGG 
50
ACCATGGAGC CATGATGAAG ACTTGAAACT CATCTCTTTC ATTCACAAGA 
100
ATGGTCATGA GAATTGGAGA TCTCTCCCAA AGCAAGCTGG ATTGTTGAGG 
150
TGTGGCAAGA GTTGTCGTCT GCGATGGATT AATTACCTCA GACCTGATGT 
200
GAAACGTGGC AATTTCAGTG CAGAGGAAGA AGACACCATC ATCAAACTTC 
250
ACCAGAGCTT TGGTAACAAG TGGTCGAAGA TTGCTTCTAA GCTGCCTGGA 
300
AGAACAGACA ATGAGATCAA GAATGTGTGG CATACACATC TCAAGAAAAG 
350
ATTGAGCTCG GAAACTAACC TTAATGCCGA TGAAGCGGGT TCAAAAGGTT 
400
CTTTGAATGA AGAAGAGAAC TCTCAAGAGT CATCTCCAAA TGCTTCAATG 
450
TCTTTTGCTG GTTCCAACAT TTCAAGCAAA GACGATGATG CACAGATAAG 
500
TCAAATGTTT GAGCACATTC TAACTTATAG CGAGTTTACG GGGATGTTAC 
550
AAGAGGTAGA CAAACCAGAG CTGCTGGAGA TGCCTTTTGA TTTAGATCCT 
600
GACATTTGGA GTTTCATAGA TGGTTCAGAC TCATTCCAAC AACCAGAGAA 
650
CAGAGCTCTT CAAGAGTCTG AAGAAGATGA AGTTGATAAA TGGTTTAAGC 
700
ACCTGGAAAG CGAACTCGGG TTAGAAGAAA ACGATAACCA ACAACAACAA 
750
CAACAGCATA AACAGGGAAC AGAAGATGAA CATTCATCAT CACTCTTGGA 
800
GAGTTACGAG CTCCTCATAC ATTAA
850

>AT1G16490.1 longest ORF length:274
MGKGRAPCCD KTKVKRGPWS HDEDLKLISF IHKNGHENWR SLPKQAGLLR 
50
CGKSCRLRWI NYLRPDVKRG NFSAEEEDTI IKLHQSFGNK WSKIASKLPG 
100
RTDNEIKNVW HTHLKKRLSS ETNLNADEAG SKGSLNEEEN SQESSPNASM 
150
SFAGSNISSK DDDAQISQMF EHILTYSEFT GMLQEVDKPE LLEMPFDLDP 
200
DIWSFIDGSD SFQQPENRAL QESEEDEVDK WFKHLESELG LEENDNQQQQ 
250
QQHKQGTEDE HSSSLLESYE LLIH
300