fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G16640 AP2/B3-like transcriptional factor family protein (.1)

>AT1G16640.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 142
StyI C|C[AT][AT]GG 74


Click here to view TAIR data

>AT1G16640.1 length:405
ATGGCTGACA CTGGTGAGGT TCAATTTATG AAGCCTTTCA TCTCAGAAAA 
50
GTCATCTAAA TCATTGGAAA TCCCCTTGGG ATTCAACGAA TACTTCCCAG 
100
CACCATTTCC AATAACTGTG GACCTCCTGG ACTATAGTGG GAGATCTTGG 
150
ACGGTTAGGA TGAAGAAAAG AGGAGAGAAA GTGTTTCTTA CAGTTGGTTG 
200
GGAGAATTTT GTAAAAGATA ACAATCTCGA AGATGGCAAG TATTTGCAGT 
250
TCATCTATGA CCGCGACAGG ACCTTTTATG TTATCATATA TGGTCATAAC 
300
ATGTGTAGCG AATATAGAGA CTTCCCTCAA GTCGCAGTAG AGGTTGATGA 
350
CTATGAAAAC GGTGAAGAAG AAGAAGACGG CGACGATCAA GACAAACATC 
400
AGTAA
450

>AT1G16640.1 longest ORF length:134
MADTGEVQFM KPFISEKSSK SLEIPLGFNE YFPAPFPITV DLLDYSGRSW 
50
TVRMKKRGEK VFLTVGWENF VKDNNLEDGK YLQFIYDRDR TFYVIIYGHN 
100
MCSEYRDFPQ VAVEVDDYEN GEEEEDGDDQ DKHQ
150