fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G17520 Homeodomain-like/winged-helix DNA-binding family protein (.1)

>AT1G17520.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 544, 710
PstI CTGCA|G 776


Click here to view TAIR data

>AT1G17520.1 length:891
ATGGGAAATC AGAAGCTCAA ATGGACGGCG GAGGAAGAGG AGGCGTTACT 
50
CGCCGGAGTT AGGAAGCATG GCCCTGGAAA GTGGAAGAAT ATTCTCCGCG 
100
ATCCTGAATT AGCTGAGCAG CTCTCTAGTC GCTCTAACAT CGACCTCAAG 
150
GATAAATGGC GTAATTTAAG TGTTGCTCCT GGTATTCAAG GCTCTAAGGA 
200
TAAGATACGG ACACCAAAAA TCAAAGCTGC TGCTTTTCAT CTGGCTGCCG 
250
CTGCTGCTGC CGCTATTGTA ACTCCTACTC ATAGTGGTCA CTCTTCTCCA 
300
GTTGCTACTC TTCCCCGAAG TGGATCTTCT GATTTGAGCA TTGATGATAG 
350
TTTTAACATT GTAGTTGATC CAAAGAATGC TCCCAGGTAT GATGGAATGA 
400
TATTTGAAGC TCTTTCAAAC TTGACGGATG CTAATGGATC TGATGTCAGC 
450
GCAATTTTCA ACTTCATTGA GCAACGACAA GAAGTGCCAC CAAATTTCAG 
500
GAGGATGCTT AGTTCAAGAT TGAGGAGGCT TGCAGCTCAG GGAAAGCTTG 
550
AAAAGGTTAG CCACTTAAAA TCAACACAGA ACTTCTATAA GATGAATGAT 
600
AATAGCTTGG TACAAAGAAC ACCACATGTA GCGAGACCAA AAGAGAGCAA 
650
CACGAAATCC CGGCAGCAGA CAAACAGTCA GGGACCCTCT ATTTCACAGC 
700
AGATTGTTGA AGCTTCAATA ACAGCAGCTT ATAAGCTCGT AGAAGTAGAG 
750
AACAAATTAG ATGTGTCGAA AGGAGCTGCA GAAGAGATAG AGAGACTGAT 
800
GAAACTGGCA GAAGAGGCTG ATGAGATGCT AGTGATAGCG AGAGAGATGC 
850
ACGAAGAATG TAGTCAGGGA AAGATTATGT ACTTGAATTG A
900

>AT1G17520.1 longest ORF length:296
MGNQKLKWTA EEEEALLAGV RKHGPGKWKN ILRDPELAEQ LSSRSNIDLK 
50
DKWRNLSVAP GIQGSKDKIR TPKIKAAAFH LAAAAAAAIV TPTHSGHSSP 
100
VATLPRSGSS DLSIDDSFNI VVDPKNAPRY DGMIFEALSN LTDANGSDVS 
150
AIFNFIEQRQ EVPPNFRRML SSRLRRLAAQ GKLEKVSHLK STQNFYKMND 
200
NSLVQRTPHV ARPKESNTKS RQQTNSQGPS ISQQIVEASI TAAYKLVEVE 
250
NKLDVSKGAA EEIERLMKLA EEADEMLVIA REMHEECSQG KIMYLN
300