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| Locus | Common name | Short description |
| AT1G17920 | HDG12 | homeodomain GLABROUS 12 (.1) |
>AT1G17920.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AflII, AgeI, AhdI, AlwI, AlwNI, ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrGI, BssHII, BssSI, BstBI, BstEII, BstXI, BstZ17I, BtrI, Cac8I, ClaI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, RsrII, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XcmI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 1017 |
| AciI | C|CGC | 654 |
| AclI | AA|CGTT | 1274 |
| AfeI | AGC|GCT | 1785 |
| AflIII | A|CPuPyGT | 1018, 1742 |
| AluI | AG|CT | 32, 178, 244, 310, 335, 384, 405, 417, 442, 888, 987, 1258, 1267, 1760 |
| Aor51HI(Eco47III) | AGC|GCT | 1785 |
| ApoI | Pu|AATTPy | 448, 1201, 1483 |
| AvaI | C|PyCGPuG | 1470 |
| AvaII | G|G[AT]CC | 528 |
| BanII | GPuGCPy|C | 418 |
| BfaI | C|TAG | 774, 813 |
| BglII | A|GATCT | 817 |
| BsaBI | GATNN|NNATC | 545 |
| BsaJI | C|CNNGG | 555, 798, 957 |
| BsaWI | [AT]|CCGG[AT] | 526 |
| BsiEI | CGPuPy|CG | 902 |
| BsiHKAI | G[AT]GC[AT]|C | 418 |
| BslI | CCNNNNN|NNGG | 339, 803 |
| BsoBI | C|PyCGPuG | 1470 |
| Bsp1286I | G[GAT]GC[CAT]|C | 418 |
| BsrDI | GCAATGNN| | 1833 |
| BsrFI | Pu|CCGGPy | 1962 |
| BsrI | ACTGGN| | 1476 |
| BssKI | |CCNGG | 555, 1686 |
| BstAPI | GCANNNN|NTGC | 1423 |
| BstF5I | GGATGNN| | 719, 1480 |
| BstNI | CC|[AT]GG | 555, 1686 |
| BstUI | CG|CG | 1017 |
| BstYI | Pu|GATCPy | 95, 817, 1809 |
| Bsu36I | CC|TNAGG | 1872 |
| BtgI | C|CPuPyGG | 957 |
| BtsI | GCAGTGNN| | 930 |
| Cfr10I | [AG]|CCGG[TC] | 1962 |
| DdeI | C|TNAG | 159, 408, 452, 595, 672, 1035, 1099, 1618, 1871 |
| DpnI | GA-CH3|TC | 94, 190, 545, 703, 765, 816, 901, 1147, 1346, 1677, 1792, 1808, 1914 |
| DpnII | |GATC | 94, 190, 545, 703, 765, 816, 901, 1147, 1346, 1677, 1792, 1808, 1914 |
| DraI | TTT|AAA | 1234 |
| EcoRI | G|AATTC | 1201 |
| Fnu4HI | GC|NGC | 441, 1545, 1762, 1782, 1900 |
| HaeII | PuGCGC|Py | 1785 |
| HaeIII | GG|CC | 1614 |
| HhaI | GCG|C | 1784 |
| HinP1I | G|CGC | 1784 |
| HincII | GTPy|PuAC | 128 |
| HindIII | A|AGCTT | 385 |
| HinfI | G|ANTC | 108, 281, 345, 363, 1309, 1316, 1361, 1489, 1714, 1748, 1770, 1980 |
| HpaII | C|CGG | 525, 1961 |
| Hpy188I | TCN|GA | 36, 491, 615, 1859, 1937 |
| HpyCH4III | ACN|GT | 16, 76, 1461, 1926, 1992, 2016 |
| HpyCH4IV | A|CGT | 1273, 1581, 1626 |
| HpyCH4V | TG|CA | 256, 400, 439, 495, 719, 907, 925, 964, 969, 1330, 1543, 1694, 1720, 1763, 1780, 1956 |
| MboI | |GATC | 94, 190, 545, 703, 765, 816, 901, 1147, 1346, 1677, 1792, 1808, 1914 |
| MluI | A|CGCGT | 1018 |
| MseI | T|TAA | 315, 354, 881, 1233, 2028 |
| MslI | CAPyNN|NNPuTG | 137, 649, 865, 962, 1804, 1831 |
| MspA1I | C[AC]G|C[GT]G | 336 |
| MspI | C|CGG | 525, 1961 |
| MwoI | GCNNNNN|NNGC | 503, 654, 995, 1266, 1423 |
| N.BstNBI | GAGTCNNNN|N | 1985 |
| NcoI | C|CATGG | 957 |
| NdeI | CA|TATG | 1088 |
| NlaIII | CATG| | 497, 859, 956, 1058, 1193, 1223, 1517, 1741, 1975 |
| NlaIV | GGN|NCC | 152, 1326, 1562 |
| NsiI | ATGCA|T | 496, 965, 1721 |
| NspI | PuCATG|Py | 498, 860, 1742 |
| PciI | A|CATGT | 1742 |
| PspGI | |CC[AT]GG | 555, 1686 |
| PvuI | CGAT|CG | 902 |
| PvuII | CAG|CTG | 336 |
| RsaI | GT|AC | 771 |
| SacI | GAGCT|C | 418 |
| Sau3AI | |GATC | 94, 190, 545, 703, 765, 816, 901, 1147, 1346, 1677, 1792, 1808, 1914 |
| Sau96I | G|GNCC | 528 |
| ScaI | AGT|ACT | 772 |
| ScrFI | CC|NGG | 555, 1686 |
| SmlI | C|TPyPuAG | 1428 |
| SpeI | A|CTAGT | 775 |
| StyI | C|C[AT][AT]GG | 798, 957 |
| Taqƒ¿I | T|CGA | 283, 393, 420, 431, 738, 899, 1053, 1203 |
| TfiI | G|A[AT]TC | 108, 281, 345, 1309, 1316, 1361, 1489, 1714, 1748 |
| TseI | G|C[AT]GC | 441, 1545, 1762, 1782, 1900 |
| Tsp45I | |GT[CG]AC | 79, 651, 1497 |
| Tsp509I | |AATT | 251, 447, 666, 879, 1200, 1482, 1589, 2026, 2042 |
| TspRI | NNCA[CG]TGNN| | 930, 1622, 1806, 2017 |
| XbaI | T|CTAGA | 814 |
| XmnI | GAANN|NNTTC | 564, 989 |
Click here to view TAIR data
>AT1G17920.1 length:2064
ATGGAGTTTC TCGGCGACAG TCAAAATCAC GATAGCTCTG AAACAGAGAA | 50 |
GAAGAACAAG AAGAAGAAGC GATTTCACCG TCACACACCT CACCAGATCC | 100 |
AACGGCTTGA ATCAACTTTC AATGAGTGTC AACATCCAGA TGAGAAACAG | 150 |
AGGAACCAAC TTAGTAGAGA GTTGGGTTTA GCTCCAAGAC AGATCAAGTT | 200 |
CTGGTTTCAA AACAGAAGAA CTCAAAAGAA GGCACAACAC GAAAGAGCTG | 250 |
ATAATTGTGC ATTGAAAGAA GAGAATGATA AGATTCGATG CGAAAACATT | 300 |
GCTATTAGAG AAGCTATTAA ACACGCCATT TGCCCCAGCT GTGGTGATTC | 350 |
TCCTGTTAAT GAAGACTCTT ACTTTGATGA GCAAAAGCTT CGCATCGAAA | 400 |
ATGCACAGCT TAGAGATGAG CTCGAAAGGG TTTCGAGTAT TGCAGCTAAA | 450 |
TTCTTAGGAA GACCAATCTC CCATCTTCCA CCATTACTAA ATCCGATGCA | 500 |
TGTTTCGCCA TTAGAGTTAT TCCATACCGG ACCTTCACTT GATTTTGATC | 550 |
TTCTCCCAGG AAGTTGTTCT TCAATGTCTG TTCCAAGTTT ACCATCTCAG | 600 |
CCAAACTTGG TTTTATCAGA GATGGATAAG TCTCTTATGA CCAACATTGC | 650 |
TGTGACCGCT ATGGAAGAAT TGCTTAGGCT TCTTCAAACA AATGAGCCTC | 700 |
TGTGGATCAA AACTGATGGA TGCAGAGATG TTCTCAATCT CGAAAACTAT | 750 |
GAGAATATGT TTACAAGATC AAGTACTAGT GGTGGAAAGA AGAATAACCT | 800 |
TGGAATGGAA GCATCTAGAT CTTCTGGTGT TGTTTTCACT AATGCTATTA | 850 |
CACTTGTGGA CATGCTTATG AACTCTGTCA AATTAACAGA GCTTTTTCCC | 900 |
TCGATCGTTG CATCATCTAA AACCCTTGCA GTGATTTCAT CGGGATTGCG | 950 |
TGGAAACCAT GGAGATGCAT TGCATTTGAT GATTGAAGAG CTTCAAGTGC | 1000 |
TTTCACCATT GGTAACAACG CGTGAGTTCT GTGTGCTAAG ATATTGTCAG | 1050 |
CAAATCGAAC ATGGAACTTG GGCAATAGTA AATGTCTCAT ATGAGTTTCC | 1100 |
TCAGTTTATA TCTCAATCTC GGTCATATAG ATTTCCTTCT GGTTGCTTGA | 1150 |
TCCAAGATAT GTCCAATGGC TATTCAAAGG TTACTTGGGT GGAACATGGT | 1200 |
GAATTCGAGG AGCAAGAACC GATACATGAG ATGTTTAAAG ATATAGTTCA | 1250 |
TAAAGGATTA GCTTTTGGAG CTGAACGTTG GATTGCTACT CTCCAAAGAA | 1300 |
TGTGTGAGAG ATTCACGAAT CTATTGGAAC CTGCAACATC ATCCCTTGAT | 1350 |
CTTGGAGGAG TGATTCCATC GCCAGAAGGG AAGAGAAGTA TAATGAGACT | 1400 |
TGCTCACAGA ATGGTAAGCA ACTTCTGCTT GAGTGTTGGC ACATCTAACA | 1450 |
ACACTCGCTC AACGGTTGTC TCGGGACTGG ATGAATTTGG AATCCGTGTG | 1500 |
ACTTCGCATA AGAGCAGACA TGAACCAAAT GGAATGGTTC TATGTGCAGC | 1550 |
CACAAGTTTC TGGCTCCCTA TTTCTCCACA AAACGTCTTC AATTTCCTCA | 1600 |
AAGATGAGAG AACTCGGCCT CAGTGGGACG TTCTTTCAAA TGGAAACTCT | 1650 |
GTTCAAGAAG TTGCTCATAT CACAAACGGA TCAAATCCTG GAAACTGCAT | 1700 |
ATCTGTTCTT CGTGGATTCA ATGCATCATC ATCACAAAAC AACATGTTGA | 1750 |
TTCTACAAGA AAGCTGCATA GACTCATCAA GTGCAGCGCT TGTGATCTAC | 1800 |
ACTCCAGTGG ATCTACCAGC GTTGAACATA GCAATGAGTG GTCAAGACAC | 1850 |
ATCTTATATT CCGATATTAC CCTCAGGTTT TGCCATTTCA CCAGACGGAA | 1900 |
GCAGCAAAGG AGGAGGATCA TTGATAACGG TTGGGTTTCA GATAATGGTG | 1950 |
AGTGGTTTGC AACCGGCAAA ACTGAACATG GAGTCAATGG AGACAGTAAA | 2000 |
TAATCTCATC AATACCACTG TCCACCAAAT TAAAACGACC TTGAATTGTC | 2050 |
CTTCAACTGC TTGA | 2100 |
>AT1G17920.1 longest ORF length:687
MEFLGDSQNH DSSETEKKNK KKKRFHRHTP HQIQRLESTF NECQHPDEKQ | 50 |
RNQLSRELGL APRQIKFWFQ NRRTQKKAQH ERADNCALKE ENDKIRCENI | 100 |
AIREAIKHAI CPSCGDSPVN EDSYFDEQKL RIENAQLRDE LERVSSIAAK | 150 |
FLGRPISHLP PLLNPMHVSP LELFHTGPSL DFDLLPGSCS SMSVPSLPSQ | 200 |
PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG CRDVLNLENY | 250 |
ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP | 300 |
SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ | 350 |
QIEHGTWAIV NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG | 400 |
EFEEQEPIHE MFKDIVHKGL AFGAERWIAT LQRMCERFTN LLEPATSSLD | 450 |
LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG TSNNTRSTVV SGLDEFGIRV | 500 |
TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP QWDVLSNGNS | 550 |
VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY | 600 |
TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV | 650 |
SGLQPAKLNM ESMETVNNLI NTTVHQIKTT LNCPSTA | 700 |