| Locus |
Common name |
Short description |
| AT1G18330 |
RVE7, EPR1 |
REVEILLE 7, EARLY-PHYTOCHROME-RESPONSIVE1, Homeodomain-like superfamily protein (.1.2) |
>AT1G18330.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccII(FnuDII)
| CG|CG |
670 |
| AciI
| C|CGC |
3, 246, 344 |
| AclI
| AA|CGTT |
106, 792 |
| AflIII
| A|CPuPyGT |
727 |
| AluI
| AG|CT |
187, 195, 301, 433, 890, 997 |
| ApoI
| Pu|AATTPy |
426 |
| AseI
| AT|TAAT |
73 |
| BfaI
| C|TAG |
755, 1036 |
| BsaAI
| PyAC|GTPu |
1028 |
| BsaBI
| GATNN|NNATC |
340, 710, 960 |
| BsaHI
| GPu|CGPyC |
215 |
| BsaJI
| C|CNNGG |
385 |
| BsiHKAI
| G[AT]GC[AT]|C |
1025 |
| BslI
| CCNNNNN|NNGG |
671 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
1025 |
| BsrDI
| GCAATGNN| |
37 |
| BsrFI
| Pu|CCGGPy |
369 |
| BsrGI
| T|GTACA |
252 |
| BsrI
| ACTGGN| |
802 |
| BstF5I
| GGATGNN| |
753 |
| BstUI
| CG|CG |
670 |
| BstXI
| CCANNNNN|NTGG |
546 |
| BstYI
| Pu|GATCPy |
910 |
| Cfr10I
| [AG]|CCGG[TC] |
369 |
| DdeI
| C|TNAG |
7, 27, 139, 295, 409, 464, 746, 838, 896 |
| DpnI
| GA-CH3|TC |
11, 321, 340, 491, 710, 909 |
| DpnII
| |GATC |
11, 321, 340, 491, 710, 909 |
| EaeI
| Py|GGCCPu |
2 |
| Fnu4HI
| GC|NGC |
3, 31 |
| HaeIII
| GG|CC |
1, 942 |
| HincII
| GTPy|PuAC |
760 |
| HindIII
| A|AGCTT |
196 |
| HinfI
| G|ANTC |
609, 678, 737 |
| HpaII
| C|CGG |
368 |
| Hpy188I
| TCN|GA |
386, 486, 612, 837, 963, 1002 |
| HpyCH4III
| ACN|GT |
125, 132, 307, 884 |
| HpyCH4IV
| A|CGT |
105, 725, 791, 1027 |
| HpyCH4V
| TG|CA |
53, 550, 811, 856, 928 |
| MboI
| |GATC |
11, 321, 340, 491, 710, 909 |
| MseI
| T|TAA |
72, 327, 714, 887 |
| MslI
| CAPyNN|NNPuTG |
1032 |
| MspA1I
| C[AC]G|C[GT]G |
5, 248 |
| MspI
| C|CGG |
368 |
| MwoI
| GCNNNNN|NNGC |
300 |
| NlaIII
| CATG| |
170, 266, 876 |
| NlaIV
| GGN|NCC |
448 |
| NsiI
| ATGCA|T |
812 |
| RsaI
| GT|AC |
127, 237, 251, 525, 798 |
| Sau3AI
| |GATC |
11, 321, 340, 491, 710, 909 |
| Taqƒ¿I
| T|CGA |
13 |
| TfiI
| G|A[AT]TC |
609, 678, 737 |
| TseI
| G|C[AT]GC |
31 |
| Tsp45I
| |GT[CG]AC |
532 |
| Tsp509I
| |AATT |
56, 70, 425, 518, 767 |
| TspRI
| NNCA[CG]TGNN| |
468, 532 |
Click here to view TAIR data
>AT1G18330.1 length:1041
ATGGCCGCTG AGGATCGAAG TGAGGAACTA AGCAGCAATG TAGAAAATGG | 50 |
AAGTTGCAAT TCCAATGAAG GAATTAATCC TGAAACCAGC AGTCATTGGA | 100 |
TTGAAAACGT TGTCAAGGTT AGGAAACCGT ACACAGTAAC TAAGCAGAGA | 150 |
GAGAAGTGGA GTGAGGAAGA GCATGATAGG TTTCTTGAAG CTATCAAGCT | 200 |
TTATGGTCGT GGTTGGCGTC AAATCCAAGA ACACATAGGT ACAAAAACCG | 250 |
CTGTACAGAT ACGAAGCCAT GCTCAAAAGT TCTTCTCCAA GATGGCTCAG | 300 |
GAAGCTGACA GTAGAAGTGA AGGATCGGTT AAAGCGATTG TGATCCCGCC | 350 |
TCCTCGTCCA AAGAGAAAAC CGGCACATCC TTATCCTCGG AAATCGCCTG | 400 |
TTCCATATAC TCAGTCTCCT CCACCAAATT TGTCAGCTAT GGAGAAAGGA | 450 |
ACCAAGTCTC CAACCTCAGT GTTATCATCG TTTGGTTCAG AGGATCAAGT | 500 |
CAATAGATGC TCTTCGCCTA ATTCGTGTAC CAGTGACATC CAATCCATTG | 550 |
GTGCAACTTC CATTGATAAA AAGAATAACT ACACAACATC CAAGCAACCT | 600 |
TTCAAAGATG ATTCTGACAT TGGTTCAACA CCCATTTCAA GCATTACTCT | 650 |
TTTCGGGAAG ATTGTCCTTG TCGCGGAAGA ATCTCACAAA CCATCCTCTT | 700 |
ACAATGATGA TGATCTTAAA CAAATGACGT GTCAGGAGAA TCACTACTCA | 750 |
GGGATGCTAG TTGACACTAA TTTATCTCTT GGTGTATGGG AAACGTTTTG | 800 |
TACTGGTTCT AATGCATTTG GCTCGGTTAC AGAAGCATCT GAGAACTTGG | 850 |
AGAAAAGTGC AGAGCCGATA AGTTCTTCAT GGAAACGGTT AAGCTCCTTA | 900 |
GAAAAACAAG GATCTTGTAA TCCTGTAAAT GCAAGTGGGT TCAGGCCATA | 950 |
CAAGAGATGC CTATCAGAAA GAGAAGTAAC ATCATCATTG ACGCTGGTAG | 1000 |
CTTCAGATGA AAAGAAAAGC CAAAGAGCAC GTATATGCTA G | 1050 |
>AT1G18330.1 longest ORF length:346
MAAEDRSEEL SSNVENGSCN SNEGINPETS SHWIENVVKV RKPYTVTKQR | 50 |
EKWSEEEHDR FLEAIKLYGR GWRQIQEHIG TKTAVQIRSH AQKFFSKMAQ | 100 |
EADSRSEGSV KAIVIPPPRP KRKPAHPYPR KSPVPYTQSP PPNLSAMEKG | 150 |
TKSPTSVLSS FGSEDQVNRC SSPNSCTSDI QSIGATSIDK KNNYTTSKQP | 200 |
FKDDSDIGST PISSITLFGK IVLVAEESHK PSSYNDDDLK QMTCQENHYS | 250 |
GMLVDTNLSL GVWETFCTGS NAFGSVTEAS ENLEKSAEPI SSSWKRLSSL | 300 |
EKQGSCNPVN ASGFRPYKRC LSEREVTSSL TLVASDEKKS QRARIC | 350 |
|