fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G18330 RVE7, EPR1 REVEILLE 7, EARLY-PHYTOCHROME-RESPONSIVE1, Homeodomain-like superfamily protein (.1.2)

>AT1G18330.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 196


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>AT1G18330.1 length:1041
ATGGCCGCTG AGGATCGAAG TGAGGAACTA AGCAGCAATG TAGAAAATGG 
50
AAGTTGCAAT TCCAATGAAG GAATTAATCC TGAAACCAGC AGTCATTGGA 
100
TTGAAAACGT TGTCAAGGTT AGGAAACCGT ACACAGTAAC TAAGCAGAGA 
150
GAGAAGTGGA GTGAGGAAGA GCATGATAGG TTTCTTGAAG CTATCAAGCT 
200
TTATGGTCGT GGTTGGCGTC AAATCCAAGA ACACATAGGT ACAAAAACCG 
250
CTGTACAGAT ACGAAGCCAT GCTCAAAAGT TCTTCTCCAA GATGGCTCAG 
300
GAAGCTGACA GTAGAAGTGA AGGATCGGTT AAAGCGATTG TGATCCCGCC 
350
TCCTCGTCCA AAGAGAAAAC CGGCACATCC TTATCCTCGG AAATCGCCTG 
400
TTCCATATAC TCAGTCTCCT CCACCAAATT TGTCAGCTAT GGAGAAAGGA 
450
ACCAAGTCTC CAACCTCAGT GTTATCATCG TTTGGTTCAG AGGATCAAGT 
500
CAATAGATGC TCTTCGCCTA ATTCGTGTAC CAGTGACATC CAATCCATTG 
550
GTGCAACTTC CATTGATAAA AAGAATAACT ACACAACATC CAAGCAACCT 
600
TTCAAAGATG ATTCTGACAT TGGTTCAACA CCCATTTCAA GCATTACTCT 
650
TTTCGGGAAG ATTGTCCTTG TCGCGGAAGA ATCTCACAAA CCATCCTCTT 
700
ACAATGATGA TGATCTTAAA CAAATGACGT GTCAGGAGAA TCACTACTCA 
750
GGGATGCTAG TTGACACTAA TTTATCTCTT GGTGTATGGG AAACGTTTTG 
800
TACTGGTTCT AATGCATTTG GCTCGGTTAC AGAAGCATCT GAGAACTTGG 
850
AGAAAAGTGC AGAGCCGATA AGTTCTTCAT GGAAACGGTT AAGCTCCTTA 
900
GAAAAACAAG GATCTTGTAA TCCTGTAAAT GCAAGTGGGT TCAGGCCATA 
950
CAAGAGATGC CTATCAGAAA GAGAAGTAAC ATCATCATTG ACGCTGGTAG 
1000
CTTCAGATGA AAAGAAAAGC CAAAGAGCAC GTATATGCTA G
1050

>AT1G18330.1 longest ORF length:346
MAAEDRSEEL SSNVENGSCN SNEGINPETS SHWIENVVKV RKPYTVTKQR 
50
EKWSEEEHDR FLEAIKLYGR GWRQIQEHIG TKTAVQIRSH AQKFFSKMAQ 
100
EADSRSEGSV KAIVIPPPRP KRKPAHPYPR KSPVPYTQSP PPNLSAMEKG 
150
TKSPTSVLSS FGSEDQVNRC SSPNSCTSDI QSIGATSIDK KNNYTTSKQP 
200
FKDDSDIGST PISSITLFGK IVLVAEESHK PSSYNDDDLK QMTCQENHYS 
250
GMLVDTNLSL GVWETFCTGS NAFGSVTEAS ENLEKSAEPI SSSWKRLSSL 
300
EKQGSCNPVN ASGFRPYKRC LSEREVTSSL TLVASDEKKS QRARIC
350