| Locus |
Common name |
Short description |
| AT1G18330 |
RVE7, EPR1 |
REVEILLE 7, EARLY-PHYTOCHROME-RESPONSIVE1, Homeodomain-like superfamily protein (.1.2) |
>AT1G18330.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccII(FnuDII)
| CG|CG |
748 |
| AciI
| C|CGC |
81, 324, 422 |
| AclI
| AA|CGTT |
184, 870 |
| AflIII
| A|CPuPyGT |
805 |
| AluI
| AG|CT |
265, 273, 379, 511, 968, 1075 |
| ApoI
| Pu|AATTPy |
504 |
| AseI
| AT|TAAT |
151 |
| BfaI
| C|TAG |
833, 1114 |
| BsaAI
| PyAC|GTPu |
1106 |
| BsaBI
| GATNN|NNATC |
418, 788, 1038 |
| BsaHI
| GPu|CGPyC |
293 |
| BsaJI
| C|CNNGG |
463 |
| BsiHKAI
| G[AT]GC[AT]|C |
1103 |
| BslI
| CCNNNNN|NNGG |
749 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
1103 |
| BsrDI
| GCAATGNN| |
115 |
| BsrFI
| Pu|CCGGPy |
447 |
| BsrGI
| T|GTACA |
330 |
| BsrI
| ACTGGN| |
880 |
| BstF5I
| GGATGNN| |
831 |
| BstUI
| CG|CG |
748 |
| BstXI
| CCANNNNN|NTGG |
624 |
| BstYI
| Pu|GATCPy |
988 |
| Cfr10I
| [AG]|CCGG[TC] |
447 |
| DdeI
| C|TNAG |
85, 105, 217, 373, 487, 542, 824, 916, 974 |
| DpnI
| GA-CH3|TC |
89, 399, 418, 569, 788, 987 |
| DpnII
| |GATC |
89, 399, 418, 569, 788, 987 |
| EaeI
| Py|GGCCPu |
80 |
| Fnu4HI
| GC|NGC |
48, 81, 109 |
| HaeIII
| GG|CC |
79, 1020 |
| HincII
| GTPy|PuAC |
838 |
| HindIII
| A|AGCTT |
274 |
| HinfI
| G|ANTC |
687, 756, 815 |
| HpaII
| C|CGG |
446 |
| Hpy188I
| TCN|GA |
64, 464, 564, 690, 915, 1041, 1080 |
| HpyCH4III
| ACN|GT |
203, 210, 385, 962 |
| HpyCH4IV
| A|CGT |
183, 803, 869, 1105 |
| HpyCH4V
| TG|CA |
46, 131, 628, 889, 934, 1006 |
| MboI
| |GATC |
89, 399, 418, 569, 788, 987 |
| MseI
| T|TAA |
74, 150, 405, 792, 965 |
| MslI
| CAPyNN|NNPuTG |
1110 |
| MspA1I
| C[AC]G|C[GT]G |
83, 326 |
| MspI
| C|CGG |
446 |
| MwoI
| GCNNNNN|NNGC |
378 |
| NlaIII
| CATG| |
248, 344, 954 |
| NlaIV
| GGN|NCC |
526 |
| NsiI
| ATGCA|T |
890 |
| RsaI
| GT|AC |
205, 315, 329, 603, 876 |
| Sau3AI
| |GATC |
89, 399, 418, 569, 788, 987 |
| Taqƒ¿I
| T|CGA |
91 |
| TfiI
| G|A[AT]TC |
687, 756, 815 |
| TseI
| G|C[AT]GC |
48, 109 |
| Tsp45I
| |GT[CG]AC |
610 |
| Tsp509I
| |AATT |
37, 134, 148, 503, 596, 845 |
| TspRI
| NNCA[CG]TGNN| |
546, 610 |
Click here to view TAIR data
>AT1G18330.2 length:1119
ATGCTCTGTT TTGTTCGCTT TCAGGCTGGT TTTGTGAGAA TTATAGTTGC | 50 |
AGCAAGAAAG CGTTTCAGAT ATTTTTTAAT GGCCGCTGAG GATCGAAGTG | 100 |
AGGAACTAAG CAGCAATGTA GAAAATGGAA GTTGCAATTC CAATGAAGGA | 150 |
ATTAATCCTG AAACCAGCAG TCATTGGATT GAAAACGTTG TCAAGGTTAG | 200 |
GAAACCGTAC ACAGTAACTA AGCAGAGAGA GAAGTGGAGT GAGGAAGAGC | 250 |
ATGATAGGTT TCTTGAAGCT ATCAAGCTTT ATGGTCGTGG TTGGCGTCAA | 300 |
ATCCAAGAAC ACATAGGTAC AAAAACCGCT GTACAGATAC GAAGCCATGC | 350 |
TCAAAAGTTC TTCTCCAAGA TGGCTCAGGA AGCTGACAGT AGAAGTGAAG | 400 |
GATCGGTTAA AGCGATTGTG ATCCCGCCTC CTCGTCCAAA GAGAAAACCG | 450 |
GCACATCCTT ATCCTCGGAA ATCGCCTGTT CCATATACTC AGTCTCCTCC | 500 |
ACCAAATTTG TCAGCTATGG AGAAAGGAAC CAAGTCTCCA ACCTCAGTGT | 550 |
TATCATCGTT TGGTTCAGAG GATCAAGTCA ATAGATGCTC TTCGCCTAAT | 600 |
TCGTGTACCA GTGACATCCA ATCCATTGGT GCAACTTCCA TTGATAAAAA | 650 |
GAATAACTAC ACAACATCCA AGCAACCTTT CAAAGATGAT TCTGACATTG | 700 |
GTTCAACACC CATTTCAAGC ATTACTCTTT TCGGGAAGAT TGTCCTTGTC | 750 |
GCGGAAGAAT CTCACAAACC ATCCTCTTAC AATGATGATG ATCTTAAACA | 800 |
AATGACGTGT CAGGAGAATC ACTACTCAGG GATGCTAGTT GACACTAATT | 850 |
TATCTCTTGG TGTATGGGAA ACGTTTTGTA CTGGTTCTAA TGCATTTGGC | 900 |
TCGGTTACAG AAGCATCTGA GAACTTGGAG AAAAGTGCAG AGCCGATAAG | 950 |
TTCTTCATGG AAACGGTTAA GCTCCTTAGA AAAACAAGGA TCTTGTAATC | 1000 |
CTGTAAATGC AAGTGGGTTC AGGCCATACA AGAGATGCCT ATCAGAAAGA | 1050 |
GAAGTAACAT CATCATTGAC GCTGGTAGCT TCAGATGAAA AGAAAAGCCA | 1100 |
AAGAGCACGT ATATGCTAG | 1150 |
>AT1G18330.2 longest ORF length:372
MLCFVRFQAG FVRIIVAARK RFRYFLMAAE DRSEELSSNV ENGSCNSNEG | 50 |
INPETSSHWI ENVVKVRKPY TVTKQREKWS EEEHDRFLEA IKLYGRGWRQ | 100 |
IQEHIGTKTA VQIRSHAQKF FSKMAQEADS RSEGSVKAIV IPPPRPKRKP | 150 |
AHPYPRKSPV PYTQSPPPNL SAMEKGTKSP TSVLSSFGSE DQVNRCSSPN | 200 |
SCTSDIQSIG ATSIDKKNNY TTSKQPFKDD SDIGSTPISS ITLFGKIVLV | 250 |
AEESHKPSSY NDDDLKQMTC QENHYSGMLV DTNLSLGVWE TFCTGSNAFG | 300 |
SVTEASENLE KSAEPISSSW KRLSSLEKQG SCNPVNASGF RPYKRCLSER | 350 |
EVTSSLTLVA SDEKKSQRAR IC | 400 |
|