fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G18330 RVE7, EPR1 REVEILLE 7, EARLY-PHYTOCHROME-RESPONSIVE1, Homeodomain-like superfamily protein (.1.2)

>AT1G18330.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 274


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>AT1G18330.2 length:1119
ATGCTCTGTT TTGTTCGCTT TCAGGCTGGT TTTGTGAGAA TTATAGTTGC 
50
AGCAAGAAAG CGTTTCAGAT ATTTTTTAAT GGCCGCTGAG GATCGAAGTG 
100
AGGAACTAAG CAGCAATGTA GAAAATGGAA GTTGCAATTC CAATGAAGGA 
150
ATTAATCCTG AAACCAGCAG TCATTGGATT GAAAACGTTG TCAAGGTTAG 
200
GAAACCGTAC ACAGTAACTA AGCAGAGAGA GAAGTGGAGT GAGGAAGAGC 
250
ATGATAGGTT TCTTGAAGCT ATCAAGCTTT ATGGTCGTGG TTGGCGTCAA 
300
ATCCAAGAAC ACATAGGTAC AAAAACCGCT GTACAGATAC GAAGCCATGC 
350
TCAAAAGTTC TTCTCCAAGA TGGCTCAGGA AGCTGACAGT AGAAGTGAAG 
400
GATCGGTTAA AGCGATTGTG ATCCCGCCTC CTCGTCCAAA GAGAAAACCG 
450
GCACATCCTT ATCCTCGGAA ATCGCCTGTT CCATATACTC AGTCTCCTCC 
500
ACCAAATTTG TCAGCTATGG AGAAAGGAAC CAAGTCTCCA ACCTCAGTGT 
550
TATCATCGTT TGGTTCAGAG GATCAAGTCA ATAGATGCTC TTCGCCTAAT 
600
TCGTGTACCA GTGACATCCA ATCCATTGGT GCAACTTCCA TTGATAAAAA 
650
GAATAACTAC ACAACATCCA AGCAACCTTT CAAAGATGAT TCTGACATTG 
700
GTTCAACACC CATTTCAAGC ATTACTCTTT TCGGGAAGAT TGTCCTTGTC 
750
GCGGAAGAAT CTCACAAACC ATCCTCTTAC AATGATGATG ATCTTAAACA 
800
AATGACGTGT CAGGAGAATC ACTACTCAGG GATGCTAGTT GACACTAATT 
850
TATCTCTTGG TGTATGGGAA ACGTTTTGTA CTGGTTCTAA TGCATTTGGC 
900
TCGGTTACAG AAGCATCTGA GAACTTGGAG AAAAGTGCAG AGCCGATAAG 
950
TTCTTCATGG AAACGGTTAA GCTCCTTAGA AAAACAAGGA TCTTGTAATC 
1000
CTGTAAATGC AAGTGGGTTC AGGCCATACA AGAGATGCCT ATCAGAAAGA 
1050
GAAGTAACAT CATCATTGAC GCTGGTAGCT TCAGATGAAA AGAAAAGCCA 
1100
AAGAGCACGT ATATGCTAG
1150

>AT1G18330.2 longest ORF length:372
MLCFVRFQAG FVRIIVAARK RFRYFLMAAE DRSEELSSNV ENGSCNSNEG 
50
INPETSSHWI ENVVKVRKPY TVTKQREKWS EEEHDRFLEA IKLYGRGWRQ 
100
IQEHIGTKTA VQIRSHAQKF FSKMAQEADS RSEGSVKAIV IPPPRPKRKP 
150
AHPYPRKSPV PYTQSPPPNL SAMEKGTKSP TSVLSSFGSE DQVNRCSSPN 
200
SCTSDIQSIG ATSIDKKNNY TTSKQPFKDD SDIGSTPISS ITLFGKIVLV 
250
AEESHKPSSY NDDDLKQMTC QENHYSGMLV DTNLSLGVWE TFCTGSNAFG 
300
SVTEASENLE KSAEPISSSW KRLSSLEKQG SCNPVNASGF RPYKRCLSER 
350
EVTSSLTLVA SDEKKSQRAR IC
400