fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G18400 bHLH044, BEE1 BR enhanced expression 1 (.1)

>AT1G18400.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 78
HindIII A|AGCTT 281
NcoI C|CATGG 44
PstI CTGCA|G 74, 638
StyI C|C[AT][AT]GG 44


Click here to view TAIR data

>AT1G18400.1 length:783
ATGGCAAATT TCGAGAATCT TTCTTCTGAT TTTCAGACAA TAGCCATGGA 
50
TATATATTCT TCCATAACTC AAGCTGCAGA TCTAAACAAC AACAACAGTA 
100
ACCTTCATTT TCAAACATTT CATCCTTCCT CTACTTCTCT CGAATCGCTC 
150
TTCCTTCATC ATCATCAACA ACAATTACTT CACTTTCCCG GAAACTCTCC 
200
AGACAGTAGT AACAATTTCT CTTCAACTTC AAGTTTCCTC CATAGTGATC 
250
ACAACATCGT CGATGAGACC AAGAAGAGAA AAGCTTTGTT ACCTACTTTG 
300
TCTTCATCAG AGACTAGCGG CGTCTCCGAT AATACGAATG TTATTGCCAC 
350
TGAAACAGGT TCTTTGAGAA GAGGTAAGAG GTTGAAGAAG AAGAAGGAAG 
400
AAGAAGACGA GAAAGAGAGA GAAGTTGTTC ATGTGAGAGC CAGAAGAGGC 
450
CAAGCCACTG ATAGCCACAG CTTAGCAGAA CGGGTTCGGC GAGGGAAAAT 
500
AAACGAGAGA TTAAGATGCT TGCAAGATAT GGTGCCCGGA TGTTATAAGG 
550
CTATGGGAAT GGCTACGATG CTTGACGAGA TAATTAATTA TGTCCAGTCT 
600
CTACAGAATC AAGTCGAGTT CCTCTCGATG AAACTCACTG CAGCAAGTTC 
650
GTTTTATGAC TTTAACTCAG AGACAGATGC AGTTGATTCC ATGCAGAGAG 
700
CAAAGGCACG TGAGACAGTG GAGATGGGGA GACAAACAAG AGATGGGAGT 
750
CCTGTCTTCC ATTTATCAAC ATGGTCCCTT TGA
800

>AT1G18400.1 longest ORF length:260
MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL 
50
FLHHHQQQLL HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL 
100
SSSETSGVSD NTNVIATETG SLRRGKRLKK KKEEEDEKER EVVHVRARRG 
150
QATDSHSLAE RVRRGKINER LRCLQDMVPG CYKAMGMATM LDEIINYVQS 
200
LQNQVEFLSM KLTAASSFYD FNSETDAVDS MQRAKARETV EMGRQTRDGS 
250
PVFHLSTWSL 
300