fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G18710 ATMYB47 myb domain protein 47 (.1)

>AT1G18710.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 564
EcoRV GAT|ATC 307
NcoI C|CATGG 272
PstI CTGCA|G 156
SalI G|TCGAC 25, 453
StyI C|C[AT][AT]GG 272
XbaI T|CTAGA 523


Click here to view TAIR data

>AT1G18710.1 length:804
ATGGGGAGGA CGACATGGTT CGACGTCGAC GGGATGAAGA AAGGAGAGTG 
50
GACGGCAGAG GAAGACCAGA AGCTCGGCGC TTACATCAAC GAGCATGGCG 
100
TTTGTGATTG GCGTTCCCTC CCCAAAAGAG CTGGTTTGCA GAGATGTGGA 
150
AAGAGCTGCA GATTAAGGTG GCTTAACTAT CTAAAGCCTG GGATTAGAAG 
200
AGGCAAATTC ACTCCTCAAG AAGAAGAAGA AATCATCCAA CTTCATGCTG 
250
TTCTCGGAAA CAGGTGGGCA GCCATGGCGA AGAAGATGCA GAATCGAACA 
300
GACAATGATA TCAAGAACCA TTGGAACTCT TGTCTCAAGA AAAGACTTTC 
350
GAGAAAGGGA ATCGACCCTA TGACCCACGA GCCCATCATC AAACACCTCA 
400
CCGTCAATAC CACTAACGCA GATTGTGGTA ACTCTTCCAC CACGACGTCC 
450
CCGTCGACGA CGGAAAGCTC TCCTTCCTCC GGCTCGTCTC GTCTTCTTAA 
500
CAAACTCGCC GCAGGTATCT CATCTAGACA ACATAGTCTC GATAGGATCA 
550
AGTACATCTT GTCGAATTCA ATAATCGAAA GCAGTGATCA AGCAAAAGAG 
600
GAAGAAGAAA AAGAAGAAGA AGAAGAAGAA AGAGATTCAA TGATGGGTCA 
650
GAAGATTGAC GGTAGTGAAG GAGAAGATAT TCAGATTTGG GGCGAGGAGG 
700
AAGTTAGGCG TTTAATGGAG ATTGATGCAA TGGATATGTA CGAGATGACT 
750
TCGTACGACG CTGTCATGTA CGAGAGTAGT CACATACTTG ATCATCTCTT 
800
TTGA
850

>AT1G18710.1 longest ORF length:267
MGRTTWFDVD GMKKGEWTAE EDQKLGAYIN EHGVCDWRSL PKRAGLQRCG 
50
KSCRLRWLNY LKPGIRRGKF TPQEEEEIIQ LHAVLGNRWA AMAKKMQNRT 
100
DNDIKNHWNS CLKKRLSRKG IDPMTHEPII KHLTVNTTNA DCGNSSTTTS 
150
PSTTESSPSS GSSRLLNKLA AGISSRQHSL DRIKYILSNS IIESSDQAKE 
200
EEEKEEEEEE RDSMMGQKID GSEGEDIQIW GEEEVRRLME IDAMDMYEMT 
250
SYDAVMYESS HILDHLF
300