Locus |
Common name |
Short description |
AT1G19000 |
|
Homeodomain-like superfamily protein (.1.2) |
>AT1G19000.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
478 |
EcoRV
| GAT|ATC |
493 |
HindIII
| A|AGCTT |
810 |
NcoI
| C|CATGG |
307, 524 |
StyI
| C|C[AT][AT]GG |
307, 524 |
Click here to view TAIR data
>AT1G19000.1 length:858
ATGGCCGCCG TTAGTAGTTC GTCGGAGACC GGAGACTGCG GCGTTACGGG | 50 |
AAAGAGAGAT GAGATCATGT TGTTCGGAGT TAGAGTCGTG GTTGATCCGA | 100 |
TGAGAAAGTG TGTGAGTTTG AACAATCTCT CTGATTATGA AAAGTCTTCT | 150 |
CCGGAGGATG AGATCCCTAA GATAGTCACC GCCGGAGCTG GAGATGGTGA | 200 |
AGATAAGAAC GAAACGGATG CGACGGTGAT TGTCGCTGAC GGTTACGCCT | 250 |
CCGCCAATGA CGCTGTCCAG ATTTCGTCTT CTTCCGGCGG GAGGAAACGA | 300 |
GGGGTTCCAT GGACAGAGAA CGAGCATAAG AGGTTCTTGA TTGGGTTGCA | 350 |
GAAAGTAGGA AAAGGAGATT GGAAAGGAAT ATCAAGAAAC TTTGTGAAGA | 400 |
GTAGGACTCC TACTCAAGTA GCTAGTCATG CTCAGAAATA CTTCCTCCGA | 450 |
CGAACCAACC TCAACCGTCG CCGAAGAAGA TCTAGCCTTT TTGATATCAC | 500 |
TACTGAGACG GTTACAGAAA TGGCCATGGA GCAAGATCCT ACTCAGGAGA | 550 |
ACTCACCACT ACCTGAAACC AACATCAGCT CTGGACAGCA AGCGATGCAA | 600 |
GTTTTTACTG ACGTGCCGAC AAAAACTGAG AATGCACCAG AGACATTTCA | 650 |
TCTCAACGAT CCATATCTGG TTCCAGTAAC CTTCCAAGCA AAGCCAACAT | 700 |
TCAATCTAAA CACAGATGCT GCTCCACTTT CTCTCAACCT TTGTCTGGCA | 750 |
TCCTCATTTA ATCTTAACGA GCAACCCAAC TCAAGACACT CGGCTTTCAC | 800 |
GATGATGCCA AGCTTCAGCG ATGGAGATAG CAATAGCAGC ATCATCAGAG | 850 |
TTGCTTAG | 900 |
>AT1G19000.1 longest ORF length:285
MAAVSSSSET GDCGVTGKRD EIMLFGVRVV VDPMRKCVSL NNLSDYEKSS | 50 |
PEDEIPKIVT AGAGDGEDKN ETDATVIVAD GYASANDAVQ ISSSSGGRKR | 100 |
GVPWTENEHK RFLIGLQKVG KGDWKGISRN FVKSRTPTQV ASHAQKYFLR | 150 |
RTNLNRRRRR SSLFDITTET VTEMAMEQDP TQENSPLPET NISSGQQAMQ | 200 |
VFTDVPTKTE NAPETFHLND PYLVPVTFQA KPTFNLNTDA APLSLNLCLA | 250 |
SSFNLNEQPN SRHSAFTMMP SFSDGDSNSS IIRVA | 300 |
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