fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G19220 IAA22, ARF11, ARF19 indole-3-acetic acid inducible 22, AUXIN RESPONSE FACTOR11, auxin response factor 19 (.1)

>AT1G19220.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NotI, PacI, SacI, SalI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 3150
HpaI GTT|AAC 1432
NcoI C|CATGG 1469
NdeI CA|TATG 1050, 1086
NheI G|CTAGC 327
PstI CTGCA|G 752, 1951, 3183, 3239
PvuII CAG|CTG 440, 655, 749, 1022
SmaI CCC|GGG 1129
SpeI A|CTAGT 3054
StyI C|C[AT][AT]GG 802, 1183, 1469, 2087, 3070


Click here to view TAIR data

>AT1G19220.1 length:3261
ATGAAAGCTC CATCAAATGG ATTTCTTCCA AGTTCCAACG AAGGAGAGAA 
50
GAAGCCAATC AATTCTCAAC TATGGCACGC TTGTGCAGGG CCTTTAGTTT 
100
CATTACCTCC TGTGGGAAGT CTTGTGGTTT ACTTCCCTCA AGGACACAGC 
150
GAGCAAGTTG CAGCATCGAT GCAGAAGCAA ACAGATTTTA TACCAAATTA 
200
CCCAAATCTT CCTTCTAAGC TGATTTGCTT GCTTCACAGT GTTACATTAC 
250
ATGCTGATAC CGAAACAGAT GAAGTCTATG CACAAATGAC TCTTCAACCT 
300
GTGAATAAGT ATGATAGAGA AGCATTGCTA GCTTCTGATA TGGGCTTGAA 
350
GCTAAACAGA CAACCTACTG AGTTTTTTTG CAAGACTCTT ACTGCAAGTG 
400
ACACAAGCAC TCATGGTGGA TTCTCTGTAC CGCGTCGTGC AGCTGAGAAA 
450
ATATTCCCTC CTCTTGATTT CTCGATGCAA CCGCCTGCGC AAGAGATTGT 
500
AGCTAAAGAT TTACATGATA CTACATGGAC TTTCAGACAT ATCTATCGAG 
550
GCCAACCAAA AAGACACTTG CTTACCACAG GTTGGAGCGT TTTTGTTAGC 
600
ACAAAGAGAC TATTTGCGGG TGATTCAGTT TTGTTTGTAA GAGATGAGAA 
650
ATCACAGCTG ATGTTGGGTA TAAGACGTGC AAATAGACAA ACTCCGACTC 
700
TTTCCTCATC GGTCATATCC AGCGACAGTA TGCACATTGG GATACTTGCA 
750
GCTGCAGCTC ATGCTAATGC CAATAGTAGC CCTTTTACCA TCTTCTTCAA 
800
TCCAAGGGCA AGTCCTTCAG AGTTTGTAGT TCCTTTAGCC AAATACAACA 
850
AAGCCTTATA CGCTCAAGTA TCTCTAGGAA TGAGATTCCG GATGATGTTT 
900
GAGACTGAGG ATTGTGGGGT TCGTAGATAT ATGGGTACAG TCACAGGTAT 
950
TAGTGATCTT GACCCTGTAA GATGGAAAGG CTCACAATGG CGTAATCTTC 
1000
AGGTAGGATG GGATGAATCA ACAGCTGGAG ATAGGCCAAG CCGAGTATCC 
1050
ATATGGGAAA TCGAACCCGT CATAACTCCT TTTTACATAT GTCCTCCTCC 
1100
ATTTTTCAGA CCTAAGTACC CGAGGCAACC CGGGATGCCA GATGATGAGT 
1150
TAGACATGGA AAATGCTTTC AAAAGAGCAA TGCCTTGGAT GGGAGAAGAC 
1200
TTTGGGATGA AGGACGCACA GAGTTCGATG TTCCCTGGTT TAAGTCTAGT 
1250
TCAATGGATG AGTATGCAGC AAAACAATCC ATTGTCAGGT TCTGCTACTC 
1300
CTCAGCTCCC GTCCGCGCTC TCATCTTTTA ACCTACCAAA CAATTTTGCT 
1350
TCCAACGACC CTTCCAAGCT GTTGAACTTC CAATCCCCAA ACCTCTCTTC 
1400
CGCAAATTCC CAATTCAACA AACCGAACAC GGTTAACCAT ATCAGCCAAC 
1450
AGATGCAAGC ACAACCAGCC ATGGTGAAAT CTCAACAACA ACAACAACAA 
1500
CAACAACAAC AACACCAACA CCAACAACAA CAACTGCAAC AACAACAACA 
1550
ACTACAGATG TCACAGCAAC AGGTGCAGCA ACAAGGGATT TATAACAATG 
1600
GTACGATTGC TGTTGCTAAC CAAGTCTCTT GTCAAAGTCC AAACCAACCT 
1650
ACTGGATTCT CTCAGTCTCA GCTTCAGCAG CAGTCAATGC TCCCTACTGG 
1700
TGCTAAAATG ACACACCAGA ACATAAATTC TATGGGGAAT AAAGGCTTGT 
1750
CTCAAATGAC ATCGTTTGCG CAAGAAATGC AGTTTCAGCA GCAACTGGAA 
1800
ATGCATAACA GTAGCCAGTT ATTAAGAAAC CAGCAAGAAC AGTCCTCTCT 
1850
CCATTCATTA CAACAAAATC TGTCCCAAAA TCCTCAGCAA CTCCAAATGC 
1900
AACAACAATC ATCAAAACCA AGTCCTTCAC AACAGCTTCA GTTGCAGCTA 
1950
CTGCAGAAGC TACAGCAGCA GCAACAGCAG CAGTCGATTC CTCCAGTAAG 
2000
CTCATCCTTA CAGCCACAAT TATCAGCGTT GCAGCAGACA CAAAGCCATC 
2050
AATTGCAACA ACTTCTGTCG TCTCAAAATC AACAGCCCTT GGCACATGGT 
2100
AATAACAGCT TCCCAGCTTC AACTTTCATG CAGCCTCCAC AGATTCAGGT 
2150
GAGTCCTCAG CAGCAAGGAC AGATGAGTAA CAAAAATCTT GTAGCCGCTG 
2200
GAAGATCACA TTCTGGCCAC ACAGATGGAG AAGCTCCTTC TTGTTCAACC 
2250
TCACCTTCCG CCAATAACAC GGGACATGAT AATGTTTCAC CGACAAATTT 
2300
CCTGAGCAGA AATCAACAGC AAGGACAAGC TGCATCTGTA TCTGCATCTG 
2350
ATTCAGTCTT TGAGCGCGCA AGCAATCCGG TCCAAGAGCT TTATACAAAA 
2400
ACTGAGAGCC GGATCAGTCA AGGCATGATG AATATGAAGA GTGCTGGTGA 
2450
ACATTTCAGA TTTAAAAGCG CGGTAACAGA TCAAATCGAT GTATCCACAG 
2500
CGGGAACGAC GTACTGTCCT GATGTTGTTG GCCCTGTACA GCAGCAACAA 
2550
ACTTTCCCAC TACCATCATT TGGTTTTGAT GGAGACTGCC AATCTCATCA 
2600
TCCAAGAAAC AACTTAGCTT TCCCTGGTAA TCTCGAAGCC GTAACTTCTG 
2650
ATCCACTCTA TTCTCAAAAG GACTTTCAAA ACTTGGTTCC CAACTATGGC 
2700
AACACACCAA GAGACATTGA GACGGAGCTG TCCAGTGCTG CAATCAGTTC 
2750
TCAGTCATTT GGTATTCCCA GCATTCCCTT TAAGCCCGGA TGTTCAAATG 
2800
AGGTTGGCGG CATCAATGAT TCAGGAATCA TGAATGGTGG AGGACTGTGG 
2850
CCCAATCAGA CTCAACGAAT GCGAACATAT ACAAAGGTTC AAAAACGAGG 
2900
GTCAGTAGGT AGATCAATAG ATGTTACCCG TTATAGCGGC TATGATGAAC 
2950
TTAGGCATGA CTTAGCGAGA ATGTTTGGCA TCGAAGGACA GCTCGAAGAT 
3000
CCGCTAACCT CTGATTGGAA ACTCGTCTAC ACCGATCACG AAAACGATAT 
3050
TTTACTAGTT GGTGATGATC CTTGGGAAGA GTTTGTGAAC TGCGTGCAGA 
3100
ACATAAAGAT ACTATCATCA GTAGAAGTTC AGCAAATGAG CTTAGACGGA 
3150
GATCTTGCAG CTATCCCAAC CACAAACCAA GCCTGCAGCG AAACAGACAG 
3200
CGGAAATGCT TGGAAAGTAC ACTATGAAGA CACTTCTGCT GCAGCTTCTT 
3250
TCAACAGATA G
3300

>AT1G19220.1 longest ORF length:1086
MKAPSNGFLP SSNEGEKKPI NSQLWHACAG PLVSLPPVGS LVVYFPQGHS 
50
EQVAASMQKQ TDFIPNYPNL PSKLICLLHS VTLHADTETD EVYAQMTLQP 
100
VNKYDREALL ASDMGLKLNR QPTEFFCKTL TASDTSTHGG FSVPRRAAEK 
150
IFPPLDFSMQ PPAQEIVAKD LHDTTWTFRH IYRGQPKRHL LTTGWSVFVS 
200
TKRLFAGDSV LFVRDEKSQL MLGIRRANRQ TPTLSSSVIS SDSMHIGILA 
250
AAAHANANSS PFTIFFNPRA SPSEFVVPLA KYNKALYAQV SLGMRFRMMF 
300
ETEDCGVRRY MGTVTGISDL DPVRWKGSQW RNLQVGWDES TAGDRPSRVS 
350
IWEIEPVITP FYICPPPFFR PKYPRQPGMP DDELDMENAF KRAMPWMGED 
400
FGMKDAQSSM FPGLSLVQWM SMQQNNPLSG SATPQLPSAL SSFNLPNNFA 
450
SNDPSKLLNF QSPNLSSANS QFNKPNTVNH ISQQMQAQPA MVKSQQQQQQ 
500
QQQQHQHQQQ QLQQQQQLQM SQQQVQQQGI YNNGTIAVAN QVSCQSPNQP 
550
TGFSQSQLQQ QSMLPTGAKM THQNINSMGN KGLSQMTSFA QEMQFQQQLE 
600
MHNSSQLLRN QQEQSSLHSL QQNLSQNPQQ LQMQQQSSKP SPSQQLQLQL 
650
LQKLQQQQQQ QSIPPVSSSL QPQLSALQQT QSHQLQQLLS SQNQQPLAHG 
700
NNSFPASTFM QPPQIQVSPQ QQGQMSNKNL VAAGRSHSGH TDGEAPSCST 
750
SPSANNTGHD NVSPTNFLSR NQQQGQAASV SASDSVFERA SNPVQELYTK 
800
TESRISQGMM NMKSAGEHFR FKSAVTDQID VSTAGTTYCP DVVGPVQQQQ 
850
TFPLPSFGFD GDCQSHHPRN NLAFPGNLEA VTSDPLYSQK DFQNLVPNYG 
900
NTPRDIETEL SSAAISSQSF GIPSIPFKPG CSNEVGGIND SGIMNGGGLW 
950
PNQTQRMRTY TKVQKRGSVG RSIDVTRYSG YDELRHDLAR MFGIEGQLED 
1000
PLTSDWKLVY TDHENDILLV GDDPWEEFVN CVQNIKILSS VEVQQMSLDG 
1050
DLAAIPTTNQ ACSETDSGNA WKVHYEDTSA AASFNR
1100