Locus |
Common name |
Short description |
AT1G19350 |
BZR2, BES1 |
BRASSINAZOLE-RESISTANT 2, BRI1-EMS-SUPPRESSOR 1, Brassinosteroid signalling positive regulator (BZR1) family protein |
>AT1G19350.1 CDS map
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Uncut enzymes: Acc65I, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BsrDI, BsrFI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstZ17I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, RsaI, RsrII, SacII, SapI, Sau96I, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
3, 24 |
AccI
| GT|[AC][TG]AC |
21 |
AflII
| C|TTAAG |
202 |
AluI
| AG|CT |
28, 34, 118, 151, 220, 758, 890, 972, 994 |
AvaI
| C|PyCGPuG |
305, 405, 416 |
BamHI
| G|GATCC |
944 |
BanI
| G|GPyPuCC |
804 |
BanII
| GPuGCPy|C |
152, 973 |
BfaI
| C|TAG |
546, 968 |
BsaHI
| GPu|CGPyC |
3, 24 |
BsaJI
| C|CNNGG |
602, 928 |
BsiHKAI
| G[AT]GC[AT]|C |
152, 512, 973 |
BslI
| CCNNNNN|NNGG |
279, 695, 933, 953 |
BsoBI
| C|PyCGPuG |
305, 405, 416 |
Bsp1286I
| G[GAT]GC[CAT]|C |
152, 512, 973 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
804 |
BsrBI
| GAG|CGG |
106 |
BsrI
| ACTGGN| |
142 |
BssKI
| |CCNGG |
279 |
BssSI
| C|TCGTG |
829 |
BstNI
| CC|[AT]GG |
279 |
BstXI
| CCANNNNN|NTGG |
602, 882 |
BstYI
| Pu|GATCPy |
944, 966 |
Bsu36I
| CC|TNAGG |
460 |
BtgI
| C|CPuPyGG |
602, 928 |
DdeI
| C|TNAG |
147, 459, 495 |
DpnI
| GA-CH3|TC |
294, 425, 943, 965 |
DpnII
| |GATC |
294, 425, 943, 965 |
Fnu4HI
| GC|NGC |
30, 36, 42, 107, 126, 606, 867 |
HincII
| GTPy|PuAC |
21 |
HindIII
| A|AGCTT |
759 |
HinfI
| G|ANTC |
407, 499, 576, 720, 726, 741 |
HpaII
| C|CGG |
695 |
Hpy188I
| TCN|GA |
6, 95, 216, 723, 894 |
Hpy99I
| CG[AT]CG| |
19, 55, 70 |
HpyCH4III
| ACN|GT |
68, 508, 614, 735 |
HpyCH4IV
| A|CGT |
2, 17, 23 |
HpyCH4V
| TG|CA |
31, 37, 655, 772, 838 |
MboI
| |GATC |
294, 425, 943, 965 |
MfeI
| C|AATTG |
850 |
MseI
| T|TAA |
201, 900, 921 |
MslI
| CAPyNN|NNPuTG |
601 |
MspA1I
| C[AC]G|C[GT]G |
29, 35 |
MspI
| C|CGG |
695 |
MwoI
| GCNNNNN|NNGC |
36, 51, 126, 654, 812 |
N.BstNBI
| GAGTCNNNN|N |
412, 725 |
NcoI
| C|CATGG |
602, 928 |
NlaIII
| CATG| |
286, 595, 601, 689, 927, 947 |
NlaIV
| GGN|NCC |
804, 944 |
PaeR7I
| C|TCGAG |
305, 416 |
PflMI
| CCANNNN|NTGG |
953 |
PspGI
| |CC[AT]GG |
279 |
PstI
| CTGCA|G |
32, 38 |
PvuII
| CAG|CTG |
29, 35 |
SacI
| GAGCT|C |
152, 973 |
SalI
| G|TCGAC |
21 |
Sau3AI
| |GATC |
294, 425, 943, 965 |
ScrFI
| CC|NGG |
279 |
SexAI
| A|CC[AT]GGT |
280 |
SfcI
| C|TPuPyAG |
32, 38 |
SmlI
| C|TPyPuAG |
155, 202, 305, 416 |
StyI
| C|C[AT][AT]GG |
602, 928 |
Taqƒ¿I
| T|CGA |
20, 304, 415 |
TfiI
| G|A[AT]TC |
499, 576, 741 |
TliI
| C|TCGAG |
305, 416 |
TseI
| G|C[AT]GC |
30, 36, 42, 606, 867 |
Tsp45I
| |GT[CG]AC |
184, 283, 519 |
Tsp509I
| |AATT |
849 |
TspRI
| NNCA[CG]TGNN| |
511, 531, 736 |
XbaI
| T|CTAGA |
547, 969 |
XcmI
| CCANNNNN|NNNNTGG |
571 |
XhoI
| C|TCGAG |
305, 416 |
Click here to view TAIR data
>AT1G19350.1 length:1008
ATGACGTCTG ACGGAGCAAC GTCGACGTCA GCTGCAGCTG CAGCAGCAGC | 50 |
GATGGCGACG AGGAGGAAAC CGTCGTGGAG AGAGAGGGAG AACAATCGGA | 100 |
GAAGAGAGCG GCGGAGAAGA GCTGTTGCGG CGAAGATTTA TACTGGTCTT | 150 |
AGAGCTCAAG GTAACTACAA TCTTCCAAAA CATTGTGACA ACAATGAGGT | 200 |
TCTTAAGGCT CTTTGTTCTG AAGCTGGTTG GGTTGTTGAA GAAGACGGAA | 250 |
CTACTTATCG CAAGGGACAC AAGCCTCTAC CTGGTGACAT GGCTGGATCA | 300 |
TCTTCTCGAG CAACTCCTTA CTCTTCCCAT AACCAAAGTC CTCTTTCTTC | 350 |
CACTTTTGAT AGCCCCATCT TATCTTACCA AGTCAGTCCT TCCTCTTCTT | 400 |
CATTCCCGAG TCCTTCTCGA GTTGGTGATC CACACAATAT CTCCACAATC | 450 |
TTCCCTTTCC TCAGGAATGG TGGTATTCCT TCATCGCTTC CTCCACTTAG | 500 |
AATCTCAAAC AGTGCTCCTG TCACTCCACC AGTGTCATCC CCAACTTCTA | 550 |
GAAACCCCAA ACCATTGCCT ACTTGGGAAT CTTTTACCAA ACAATCCATG | 600 |
TCCATGGCTG CTAAACAGTC AATGACTTCT TTGAACTACC CGTTTTATGC | 650 |
GGTGTCTGCA CCTGCCAGTC CTACTCATCA TCGCCAGTTC CATGCTCCGG | 700 |
CTACTATACC TGAATGTGAT GAGTCTGACT CTTCCACTGT TGATTCTGGT | 750 |
CATTGGATAA GCTTTCAAAA GTTTGCACAA CAACAGCCAT TCTCTGCCTC | 800 |
TATGGTGCCA ACCTCGCCTA CCTTCAATCT CGTGAAACCT GCACCACAGC | 850 |
AATTGTCTCC AAACACAGCA GCAATCCAAG AGATTGGTCA AAGCTCCGAG | 900 |
TTTAAGTTTG AGAACAGCCA AGTTAAGCCA TGGGAAGGGG AGAGGATCCA | 950 |
TGATGTGGCT ATGGAGGATC TAGAGCTCAC GCTTGGAAAT GGTAAAGCTC | 1000 |
ATAGTTGA | 1050 |
>AT1G19350.1 longest ORF length:335
MTSDGATSTS AAAAAAAMAT RRKPSWRERE NNRRRERRRR AVAAKIYTGL | 50 |
RAQGNYNLPK HCDNNEVLKA LCSEAGWVVE EDGTTYRKGH KPLPGDMAGS | 100 |
SSRATPYSSH NQSPLSSTFD SPILSYQVSP SSSSFPSPSR VGDPHNISTI | 150 |
FPFLRNGGIP SSLPPLRISN SAPVTPPVSS PTSRNPKPLP TWESFTKQSM | 200 |
SMAAKQSMTS LNYPFYAVSA PASPTHHRQF HAPATIPECD ESDSSTVDSG | 250 |
HWISFQKFAQ QQPFSASMVP TSPTFNLVKP APQQLSPNTA AIQEIGQSSE | 300 |
FKFENSQVKP WEGERIHDVA MEDLELTLGN GKAHS | 350 |
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