Locus |
Common name |
Short description |
AT1G19350 |
BZR2, BES1 |
BRASSINAZOLE-RESISTANT 2, BRI1-EMS-SUPPRESSOR 1, Brassinosteroid signalling positive regulator (BZR1) family protein |
>AT1G19350.3 CDS map
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Uncut enzymes: Acc65I, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BsrDI, BsrFI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstZ17I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, RsaI, RsrII, SacII, SapI, Sau96I, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XmaI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
69, 90 |
AccI
| GT|[AC][TG]AC |
87 |
AflII
| C|TTAAG |
268 |
AluI
| AG|CT |
94, 100, 184, 217, 286, 824, 956, 1038, 1060 |
AvaI
| C|PyCGPuG |
371, 471, 482 |
BamHI
| G|GATCC |
1010 |
BanI
| G|GPyPuCC |
870 |
BanII
| GPuGCPy|C |
218, 1039 |
BfaI
| C|TAG |
612, 1034 |
BsaHI
| GPu|CGPyC |
69, 90 |
BsaJI
| C|CNNGG |
668, 994 |
BsiHKAI
| G[AT]GC[AT]|C |
218, 578, 1039 |
BslI
| CCNNNNN|NNGG |
345, 761, 999, 1019 |
BsoBI
| C|PyCGPuG |
371, 471, 482 |
Bsp1286I
| G[GAT]GC[CAT]|C |
218, 578, 1039 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
870 |
BsrBI
| GAG|CGG |
172 |
BsrI
| ACTGGN| |
208 |
BssKI
| |CCNGG |
345 |
BssSI
| C|TCGTG |
895 |
BstNI
| CC|[AT]GG |
345 |
BstXI
| CCANNNNN|NTGG |
668, 948 |
BstYI
| Pu|GATCPy |
1010, 1032 |
Bsu36I
| CC|TNAGG |
526 |
BtgI
| C|CPuPyGG |
668, 994 |
DdeI
| C|TNAG |
213, 525, 561 |
DpnI
| GA-CH3|TC |
360, 491, 1009, 1031 |
DpnII
| |GATC |
360, 491, 1009, 1031 |
Fnu4HI
| GC|NGC |
96, 102, 108, 173, 192, 672, 933 |
HincII
| GTPy|PuAC |
87 |
HindIII
| A|AGCTT |
825 |
HinfI
| G|ANTC |
7, 473, 565, 642, 786, 792, 807 |
HpaII
| C|CGG |
761 |
Hpy188I
| TCN|GA |
72, 161, 282, 789, 960 |
Hpy99I
| CG[AT]CG| |
85, 121, 136 |
HpyCH4III
| ACN|GT |
134, 574, 680, 801 |
HpyCH4IV
| A|CGT |
68, 83, 89 |
HpyCH4V
| TG|CA |
97, 103, 721, 838, 904 |
MboI
| |GATC |
360, 491, 1009, 1031 |
MfeI
| C|AATTG |
916 |
MseI
| T|TAA |
267, 966, 987 |
MslI
| CAPyNN|NNPuTG |
667 |
MspA1I
| C[AC]G|C[GT]G |
95, 101 |
MspI
| C|CGG |
761 |
MwoI
| GCNNNNN|NNGC |
102, 117, 192, 720, 878 |
N.BstNBI
| GAGTCNNNN|N |
478, 791 |
NcoI
| C|CATGG |
668, 994 |
NlaIII
| CATG| |
352, 661, 667, 755, 993, 1013 |
NlaIV
| GGN|NCC |
870, 1010 |
PaeR7I
| C|TCGAG |
371, 482 |
PflMI
| CCANNNN|NTGG |
1019 |
PspGI
| |CC[AT]GG |
345 |
PstI
| CTGCA|G |
98, 104 |
PvuII
| CAG|CTG |
95, 101 |
SacI
| GAGCT|C |
218, 1039 |
SalI
| G|TCGAC |
87 |
Sau3AI
| |GATC |
360, 491, 1009, 1031 |
ScrFI
| CC|NGG |
345 |
SexAI
| A|CC[AT]GGT |
346 |
SfcI
| C|TPuPyAG |
98, 104 |
SmlI
| C|TPyPuAG |
221, 268, 371, 482 |
StyI
| C|C[AT][AT]GG |
668, 994 |
Taqƒ¿I
| T|CGA |
56, 86, 370, 481 |
TfiI
| G|A[AT]TC |
7, 565, 642, 807 |
TliI
| C|TCGAG |
371, 482 |
TseI
| G|C[AT]GC |
96, 102, 108, 672, 933 |
Tsp45I
| |GT[CG]AC |
250, 349, 585 |
Tsp509I
| |AATT |
17, 915 |
TspRI
| NNCA[CG]TGNN| |
577, 597, 802 |
XbaI
| T|CTAGA |
613, 1035 |
XcmI
| CCANNNNN|NNNNTGG |
637 |
XhoI
| C|TCGAG |
371, 482 |
XmnI
| GAANN|NNTTC |
7 |
Click here to view TAIR data
>AT1G19350.3 length:1074
ATGAAAAGAT TCTTCTATAA TTCCAGCGAA GAAGAAAGAA AAAAAAAAGC | 50 |
GTATTCCTCG AAGAAGATGA CGTCTGACGG AGCAACGTCG ACGTCAGCTG | 100 |
CAGCTGCAGC AGCAGCGATG GCGACGAGGA GGAAACCGTC GTGGAGAGAG | 150 |
AGGGAGAACA ATCGGAGAAG AGAGCGGCGG AGAAGAGCTG TTGCGGCGAA | 200 |
GATTTATACT GGTCTTAGAG CTCAAGGTAA CTACAATCTT CCAAAACATT | 250 |
GTGACAACAA TGAGGTTCTT AAGGCTCTTT GTTCTGAAGC TGGTTGGGTT | 300 |
GTTGAAGAAG ACGGAACTAC TTATCGCAAG GGACACAAGC CTCTACCTGG | 350 |
TGACATGGCT GGATCATCTT CTCGAGCAAC TCCTTACTCT TCCCATAACC | 400 |
AAAGTCCTCT TTCTTCCACT TTTGATAGCC CCATCTTATC TTACCAAGTC | 450 |
AGTCCTTCCT CTTCTTCATT CCCGAGTCCT TCTCGAGTTG GTGATCCACA | 500 |
CAATATCTCC ACAATCTTCC CTTTCCTCAG GAATGGTGGT ATTCCTTCAT | 550 |
CGCTTCCTCC ACTTAGAATC TCAAACAGTG CTCCTGTCAC TCCACCAGTG | 600 |
TCATCCCCAA CTTCTAGAAA CCCCAAACCA TTGCCTACTT GGGAATCTTT | 650 |
TACCAAACAA TCCATGTCCA TGGCTGCTAA ACAGTCAATG ACTTCTTTGA | 700 |
ACTACCCGTT TTATGCGGTG TCTGCACCTG CCAGTCCTAC TCATCATCGC | 750 |
CAGTTCCATG CTCCGGCTAC TATACCTGAA TGTGATGAGT CTGACTCTTC | 800 |
CACTGTTGAT TCTGGTCATT GGATAAGCTT TCAAAAGTTT GCACAACAAC | 850 |
AGCCATTCTC TGCCTCTATG GTGCCAACCT CGCCTACCTT CAATCTCGTG | 900 |
AAACCTGCAC CACAGCAATT GTCTCCAAAC ACAGCAGCAA TCCAAGAGAT | 950 |
TGGTCAAAGC TCCGAGTTTA AGTTTGAGAA CAGCCAAGTT AAGCCATGGG | 1000 |
AAGGGGAGAG GATCCATGAT GTGGCTATGG AGGATCTAGA GCTCACGCTT | 1050 |
GGAAATGGTA AAGCTCATAG TTGA | 1100 |
>AT1G19350.3 longest ORF length:357
MKRFFYNSSE EERKKKAYSS KKMTSDGATS TSAAAAAAAM ATRRKPSWRE | 50 |
RENNRRRERR RRAVAAKIYT GLRAQGNYNL PKHCDNNEVL KALCSEAGWV | 100 |
VEEDGTTYRK GHKPLPGDMA GSSSRATPYS SHNQSPLSST FDSPILSYQV | 150 |
SPSSSSFPSP SRVGDPHNIS TIFPFLRNGG IPSSLPPLRI SNSAPVTPPV | 200 |
SSPTSRNPKP LPTWESFTKQ SMSMAAKQSM TSLNYPFYAV SAPASPTHHR | 250 |
QFHAPATIPE CDESDSSTVD SGHWISFQKF AQQQPFSASM VPTSPTFNLV | 300 |
KPAPQQLSPN TAAIQEIGQS SEFKFENSQV KPWEGERIHD VAMEDLELTL | 350 |
GNGKAHS | 400 |
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