fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G19350 BZR2, BES1 BRASSINAZOLE-RESISTANT 2, BRI1-EMS-SUPPRESSOR 1, Brassinosteroid signalling positive regulator (BZR1) family protein

>AT1G19350.3 CDS map

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Uncut enzymes: Acc65I, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BsrDI, BsrFI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstZ17I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, RsaI, RsrII, SacII, SapI, Sau96I, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XmaI
Name Recognition sequence Cut positions
AatII GACGT|C 69, 90
AccI GT|[AC][TG]AC 87
AflII C|TTAAG 268
AluI AG|CT 94, 100, 184, 217, 286, 824, 956, 1038, 1060
AvaI C|PyCGPuG 371, 471, 482
BamHI G|GATCC 1010
BanI G|GPyPuCC 870
BanII GPuGCPy|C 218, 1039
BfaI C|TAG 612, 1034
BsaHI GPu|CGPyC 69, 90
BsaJI C|CNNGG 668, 994
BsiHKAI G[AT]GC[AT]|C 218, 578, 1039
BslI CCNNNNN|NNGG 345, 761, 999, 1019
BsoBI C|PyCGPuG 371, 471, 482
Bsp1286I G[GAT]GC[CAT]|C 218, 578, 1039
BspT107I(HgiCI) G|G[TC][AG]CC 870
BsrBI GAG|CGG 172
BsrI ACTGGN| 208
BssKI |CCNGG 345
BssSI C|TCGTG 895
BstNI CC|[AT]GG 345
BstXI CCANNNNN|NTGG 668, 948
BstYI Pu|GATCPy 1010, 1032
Bsu36I CC|TNAGG 526
BtgI C|CPuPyGG 668, 994
DdeI C|TNAG 213, 525, 561
DpnI GA-CH3|TC 360, 491, 1009, 1031
DpnII |GATC 360, 491, 1009, 1031
Fnu4HI GC|NGC 96, 102, 108, 173, 192, 672, 933
HincII GTPy|PuAC 87
HindIII A|AGCTT 825
HinfI G|ANTC 7, 473, 565, 642, 786, 792, 807
HpaII C|CGG 761
Hpy188I TCN|GA 72, 161, 282, 789, 960
Hpy99I CG[AT]CG| 85, 121, 136
HpyCH4III ACN|GT 134, 574, 680, 801
HpyCH4IV A|CGT 68, 83, 89
HpyCH4V TG|CA 97, 103, 721, 838, 904
MboI |GATC 360, 491, 1009, 1031
MfeI C|AATTG 916
MseI T|TAA 267, 966, 987
MslI CAPyNN|NNPuTG 667
MspA1I C[AC]G|C[GT]G 95, 101
MspI C|CGG 761
MwoI GCNNNNN|NNGC 102, 117, 192, 720, 878
N.BstNBI GAGTCNNNN|N 478, 791
NcoI C|CATGG 668, 994
NlaIII CATG| 352, 661, 667, 755, 993, 1013
NlaIV GGN|NCC 870, 1010
PaeR7I C|TCGAG 371, 482
PflMI CCANNNN|NTGG 1019
PspGI |CC[AT]GG 345
PstI CTGCA|G 98, 104
PvuII CAG|CTG 95, 101
SacI GAGCT|C 218, 1039
SalI G|TCGAC 87
Sau3AI |GATC 360, 491, 1009, 1031
ScrFI CC|NGG 345
SexAI A|CC[AT]GGT 346
SfcI C|TPuPyAG 98, 104
SmlI C|TPyPuAG 221, 268, 371, 482
StyI C|C[AT][AT]GG 668, 994
Taqƒ¿I T|CGA 56, 86, 370, 481
TfiI G|A[AT]TC 7, 565, 642, 807
TliI C|TCGAG 371, 482
TseI G|C[AT]GC 96, 102, 108, 672, 933
Tsp45I |GT[CG]AC 250, 349, 585
Tsp509I |AATT 17, 915
TspRI NNCA[CG]TGNN| 577, 597, 802
XbaI T|CTAGA 613, 1035
XcmI CCANNNNN|NNNNTGG 637
XhoI C|TCGAG 371, 482
XmnI GAANN|NNTTC 7


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>AT1G19350.3 length:1074
ATGAAAAGAT TCTTCTATAA TTCCAGCGAA GAAGAAAGAA AAAAAAAAGC 
50
GTATTCCTCG AAGAAGATGA CGTCTGACGG AGCAACGTCG ACGTCAGCTG 
100
CAGCTGCAGC AGCAGCGATG GCGACGAGGA GGAAACCGTC GTGGAGAGAG 
150
AGGGAGAACA ATCGGAGAAG AGAGCGGCGG AGAAGAGCTG TTGCGGCGAA 
200
GATTTATACT GGTCTTAGAG CTCAAGGTAA CTACAATCTT CCAAAACATT 
250
GTGACAACAA TGAGGTTCTT AAGGCTCTTT GTTCTGAAGC TGGTTGGGTT 
300
GTTGAAGAAG ACGGAACTAC TTATCGCAAG GGACACAAGC CTCTACCTGG 
350
TGACATGGCT GGATCATCTT CTCGAGCAAC TCCTTACTCT TCCCATAACC 
400
AAAGTCCTCT TTCTTCCACT TTTGATAGCC CCATCTTATC TTACCAAGTC 
450
AGTCCTTCCT CTTCTTCATT CCCGAGTCCT TCTCGAGTTG GTGATCCACA 
500
CAATATCTCC ACAATCTTCC CTTTCCTCAG GAATGGTGGT ATTCCTTCAT 
550
CGCTTCCTCC ACTTAGAATC TCAAACAGTG CTCCTGTCAC TCCACCAGTG 
600
TCATCCCCAA CTTCTAGAAA CCCCAAACCA TTGCCTACTT GGGAATCTTT 
650
TACCAAACAA TCCATGTCCA TGGCTGCTAA ACAGTCAATG ACTTCTTTGA 
700
ACTACCCGTT TTATGCGGTG TCTGCACCTG CCAGTCCTAC TCATCATCGC 
750
CAGTTCCATG CTCCGGCTAC TATACCTGAA TGTGATGAGT CTGACTCTTC 
800
CACTGTTGAT TCTGGTCATT GGATAAGCTT TCAAAAGTTT GCACAACAAC 
850
AGCCATTCTC TGCCTCTATG GTGCCAACCT CGCCTACCTT CAATCTCGTG 
900
AAACCTGCAC CACAGCAATT GTCTCCAAAC ACAGCAGCAA TCCAAGAGAT 
950
TGGTCAAAGC TCCGAGTTTA AGTTTGAGAA CAGCCAAGTT AAGCCATGGG 
1000
AAGGGGAGAG GATCCATGAT GTGGCTATGG AGGATCTAGA GCTCACGCTT 
1050
GGAAATGGTA AAGCTCATAG TTGA
1100

>AT1G19350.3 longest ORF length:357
MKRFFYNSSE EERKKKAYSS KKMTSDGATS TSAAAAAAAM ATRRKPSWRE 
50
RENNRRRERR RRAVAAKIYT GLRAQGNYNL PKHCDNNEVL KALCSEAGWV 
100
VEEDGTTYRK GHKPLPGDMA GSSSRATPYS SHNQSPLSST FDSPILSYQV 
150
SPSSSSFPSP SRVGDPHNIS TIFPFLRNGG IPSSLPPLRI SNSAPVTPPV 
200
SSPTSRNPKP LPTWESFTKQ SMSMAAKQSM TSLNYPFYAV SAPASPTHHR 
250
QFHAPATIPE CDESDSSTVD SGHWISFQKF AQQQPFSASM VPTSPTFNLV 
300
KPAPQQLSPN TAAIQEIGQS SEFKFENSQV KPWEGERIHD VAMEDLELTL 
350
GNGKAHS
400