fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G19350 BZR2, BES1 BRASSINAZOLE-RESISTANT 2, BRI1-EMS-SUPPRESSOR 1, Brassinosteroid signalling positive regulator (BZR1) family protein

>AT1G19350.4 CDS map

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Uncut enzymes: Acc65I, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BsrDI, BsrFI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstZ17I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, RsaI, RsrII, SacII, SapI, Sau96I, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XmaI, XmnI
Name Recognition sequence Cut positions
AatII GACGT|C 3, 24
AccI GT|[AC][TG]AC 21
AflII C|TTAAG 202
AluI AG|CT 28, 34, 118, 151, 220, 758, 890, 972, 994
AvaI C|PyCGPuG 305, 405, 416
BamHI G|GATCC 944
BanI G|GPyPuCC 804
BanII GPuGCPy|C 152, 973
BfaI C|TAG 546, 968
BsaHI GPu|CGPyC 3, 24
BsaJI C|CNNGG 602, 928
BsiHKAI G[AT]GC[AT]|C 152, 512, 973
BslI CCNNNNN|NNGG 279, 695, 933, 953
BsoBI C|PyCGPuG 305, 405, 416
Bsp1286I G[GAT]GC[CAT]|C 152, 512, 973
BspT107I(HgiCI) G|G[TC][AG]CC 804
BsrBI GAG|CGG 106
BsrI ACTGGN| 142
BssKI |CCNGG 279
BssSI C|TCGTG 829
BstNI CC|[AT]GG 279
BstXI CCANNNNN|NTGG 602, 882
BstYI Pu|GATCPy 944, 966
Bsu36I CC|TNAGG 460
BtgI C|CPuPyGG 602, 928
DdeI C|TNAG 147, 459, 495
DpnI GA-CH3|TC 294, 425, 943, 965
DpnII |GATC 294, 425, 943, 965
Fnu4HI GC|NGC 30, 36, 42, 107, 126, 606, 867
HincII GTPy|PuAC 21
HindIII A|AGCTT 759
HinfI G|ANTC 407, 499, 576, 720, 726, 741
HpaII C|CGG 695
Hpy188I TCN|GA 6, 95, 216, 723, 894
Hpy99I CG[AT]CG| 19, 55, 70
HpyCH4III ACN|GT 68, 508, 614, 735
HpyCH4IV A|CGT 2, 17, 23
HpyCH4V TG|CA 31, 37, 655, 772, 838
MboI |GATC 294, 425, 943, 965
MfeI C|AATTG 850
MseI T|TAA 201, 900, 921
MslI CAPyNN|NNPuTG 601
MspA1I C[AC]G|C[GT]G 29, 35
MspI C|CGG 695
MwoI GCNNNNN|NNGC 36, 51, 126, 654, 812
N.BstNBI GAGTCNNNN|N 412, 725
NcoI C|CATGG 602, 928
NlaIII CATG| 286, 595, 601, 689, 927, 947
NlaIV GGN|NCC 804, 944
PaeR7I C|TCGAG 305, 416
PflMI CCANNNN|NTGG 953
PspGI |CC[AT]GG 279
PstI CTGCA|G 32, 38
PvuII CAG|CTG 29, 35
SacI GAGCT|C 152, 973
SalI G|TCGAC 21
Sau3AI |GATC 294, 425, 943, 965
ScrFI CC|NGG 279
SexAI A|CC[AT]GGT 280
SfcI C|TPuPyAG 32, 38
SmlI C|TPyPuAG 155, 202, 305, 416
StyI C|C[AT][AT]GG 602, 928
Taqƒ¿I T|CGA 20, 304, 415
TfiI G|A[AT]TC 499, 576, 741
TliI C|TCGAG 305, 416
TseI G|C[AT]GC 30, 36, 42, 606, 867
Tsp45I |GT[CG]AC 184, 283, 519
Tsp509I |AATT 849
TspRI NNCA[CG]TGNN| 511, 531, 736
XbaI T|CTAGA 547, 969
XcmI CCANNNNN|NNNNTGG 571
XhoI C|TCGAG 305, 416


Click here to view TAIR data

>AT1G19350.4 length:1008
ATGACGTCTG ACGGAGCAAC GTCGACGTCA GCTGCAGCTG CAGCAGCAGC 
50
GATGGCGACG AGGAGGAAAC CGTCGTGGAG AGAGAGGGAG AACAATCGGA 
100
GAAGAGAGCG GCGGAGAAGA GCTGTTGCGG CGAAGATTTA TACTGGTCTT 
150
AGAGCTCAAG GTAACTACAA TCTTCCAAAA CATTGTGACA ACAATGAGGT 
200
TCTTAAGGCT CTTTGTTCTG AAGCTGGTTG GGTTGTTGAA GAAGACGGAA 
250
CTACTTATCG CAAGGGACAC AAGCCTCTAC CTGGTGACAT GGCTGGATCA 
300
TCTTCTCGAG CAACTCCTTA CTCTTCCCAT AACCAAAGTC CTCTTTCTTC 
350
CACTTTTGAT AGCCCCATCT TATCTTACCA AGTCAGTCCT TCCTCTTCTT 
400
CATTCCCGAG TCCTTCTCGA GTTGGTGATC CACACAATAT CTCCACAATC 
450
TTCCCTTTCC TCAGGAATGG TGGTATTCCT TCATCGCTTC CTCCACTTAG 
500
AATCTCAAAC AGTGCTCCTG TCACTCCACC AGTGTCATCC CCAACTTCTA 
550
GAAACCCCAA ACCATTGCCT ACTTGGGAAT CTTTTACCAA ACAATCCATG 
600
TCCATGGCTG CTAAACAGTC AATGACTTCT TTGAACTACC CGTTTTATGC 
650
GGTGTCTGCA CCTGCCAGTC CTACTCATCA TCGCCAGTTC CATGCTCCGG 
700
CTACTATACC TGAATGTGAT GAGTCTGACT CTTCCACTGT TGATTCTGGT 
750
CATTGGATAA GCTTTCAAAA GTTTGCACAA CAACAGCCAT TCTCTGCCTC 
800
TATGGTGCCA ACCTCGCCTA CCTTCAATCT CGTGAAACCT GCACCACAGC 
850
AATTGTCTCC AAACACAGCA GCAATCCAAG AGATTGGTCA AAGCTCCGAG 
900
TTTAAGTTTG AGAACAGCCA AGTTAAGCCA TGGGAAGGGG AGAGGATCCA 
950
TGATGTGGCT ATGGAGGATC TAGAGCTCAC GCTTGGAAAT GGTAAAGCTC 
1000
ATAGTTGA
1050

>AT1G19350.4 longest ORF length:335
MTSDGATSTS AAAAAAAMAT RRKPSWRERE NNRRRERRRR AVAAKIYTGL 
50
RAQGNYNLPK HCDNNEVLKA LCSEAGWVVE EDGTTYRKGH KPLPGDMAGS 
100
SSRATPYSSH NQSPLSSTFD SPILSYQVSP SSSSFPSPSR VGDPHNISTI 
150
FPFLRNGGIP SSLPPLRISN SAPVTPPVSS PTSRNPKPLP TWESFTKQSM 
200
SMAAKQSMTS LNYPFYAVSA PASPTHHRQF HAPATIPECD ESDSSTVDSG 
250
HWISFQKFAQ QQPFSASMVP TSPTFNLVKP APQQLSPNTA AIQEIGQSSE 
300
FKFENSQVKP WEGERIHDVA MEDLELTLGN GKAHS
350