fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G19510 RSM4, ATRL5 RADIALIS-LIKE SANT/MYB 4, RAD-like 5 (.1)

>AT1G19510.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI
Name Recognition sequence Cut positions
BglII A|GATCT 177
PstI CTGCA|G 137
SacI GAGCT|C 18, 24
XbaI T|CTAGA 247
XhoI C|TCGAG 21


Click here to view TAIR data

>AT1G19510.1 length:303
ATGGCCTCTA GTTCTATGAG CTCGAGCTCT TCTTGGACGT CTAAGCAAAA 
50
CAAGATGTTC GAGAGGGCTT TAGCCGTTTA CGATAAAGAC ACTCCCGACC 
100
GTTGGCAAAA CGTGGCTAAA GCAGTTGGAA GTAAATCTGC AGAGGAAGTT 
150
AAACGTCACT ACGACATCCT CGTTGAAGAT CTCATGAACA TCGAACAAGA 
200
CTTAGTACCT TTGCCTAAAT ACAAAACCGT CGATGTTGGA AGTAAATCTA 
250
GAGGCATCGA TGATTTTGAT TTGAGGTTAA TGAAGAATAT GAGAATCCAG 
300
TGA
350

>AT1G19510.1 longest ORF length:100
MASSSMSSSS SWTSKQNKMF ERALAVYDKD TPDRWQNVAK AVGSKSAEEV 
50
KRHYDILVED LMNIEQDLVP LPKYKTVDVG SKSRGIDDFD LRLMKNMRIQ 
100