fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G19700 BEL10, BLH10 BEL1-like homeodomain 10 (.1.2.3)

>AT1G19700.1 CDS map

>>Show genomic map




Uncut enzymes: AatII, AccI, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspEI, BspHI, BspMI, BsrBI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, MboII, MluI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SfaNI, SfiI, SfoI, SmaI, SmlI, SnaBI, SphI, StuI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
Acc65I G|GTACC 193
AccII(FnuDII) CG|CG 881, 1097, 1210
AciI C|CGC 93, 99, 1483
AluI AG|CT 79, 215, 699, 720, 787, 823, 1015, 1029
ApoI Pu|AATTPy 528, 902
BanI G|GPyPuCC 193
BfaI C|TAG 306, 1445
BglII A|GATCT 260
BlpI GC|TNAGC 827
BsaJI C|CNNGG 249, 976
BsiHKAI G[AT]GC[AT]|C 875
BslI CCNNNNN|NNGG 414, 776, 1065, 1490
Bsp1286I G[GAT]GC[CAT]|C 875
BspDI AT|CGAT 669
BspT107I(HgiCI) G|G[TC][AG]CC 193
BsrDI GCAATGNN| 1453
BsrFI Pu|CCGGPy 118
BssKI |CCNGG 1187
BstBI TT|CGAA 134, 657
BstF5I GGATGNN| 358, 952
BstNI CC|[AT]GG 1187
BstUI CG|CG 881, 1097, 1210
BstYI Pu|GATCPy 260
Cac8I GCN|NGC 1158
Cfr10I [AG]|CCGG[TC] 118
ClaI AT|CGAT 669
DdeI C|TNAG 213, 256, 523, 616, 826, 1144, 1276
DpnI GA-CH3|TC 209, 259, 385, 404, 819, 992, 1237, 1436
DpnII |GATC 209, 259, 385, 404, 819, 992, 1237, 1436
DrdI GACNNNN|NNGTC 1176
EcoNI CCTNN|NNNAGG 1065
Fnu4HI GC|NGC 96, 121, 205, 490, 1340, 1346, 1352
HhaI GCG|C 1098
HinP1I G|CGC 1098
HindIII A|AGCTT 80, 216, 721
HinfI G|ANTC 314, 654, 856, 942, 1140, 1272, 1329, 1576
HpaII C|CGG 117
Hpy188I TCN|GA 257, 311, 402, 524, 704, 905, 1133, 1143, 1275, 1422, 1491, 1505
Hpy99I CG[AT]CG| 884
HpyCH4III ACN|GT 111, 129, 190, 195, 236, 344, 607, 998, 1540
HpyCH4IV A|CGT 174, 338, 691
HpyCH4V TG|CA 1020, 1159, 1393
KpnI GGTAC|C 193
MboI |GATC 209, 259, 385, 404, 819, 992, 1237, 1436
MfeI C|AATTG 295, 686
MseI T|TAA 513, 594, 603, 725
MslI CAPyNN|NNPuTG 356, 872, 1507
MspI C|CGG 117
MwoI GCNNNNN|NNGC 214, 1028, 1163, 1346
N.BstNBI GAGTCNNNN|N 947
NlaIII CATG| 350, 1153
NlaIV GGN|NCC 193
NruI TCG|CGA 882
PflMI CCANNNN|NTGG 776
PspGI |CC[AT]GG 1187
PstI CTGCA|G 1394
RsaI GT|AC 192, 252
Sau3AI |GATC 209, 259, 385, 404, 819, 992, 1237, 1436
ScrFI CC|NGG 1187
SexAI A|CC[AT]GGT 1188
SfcI C|TPuPyAG 1394
SgrAI CPu|CCGGPyG 119
SpeI A|CTAGT 307
SspI AAT|ATT 764
StyI C|C[AT][AT]GG 249, 976
Taqƒ¿I T|CGA 133, 647, 656, 668, 1042, 1239
TfiI G|A[AT]TC 314, 654, 856, 1140, 1272, 1576
TseI G|C[AT]GC 205, 490, 1340, 1346, 1352
Tsp45I |GT[CG]AC 114, 341
Tsp509I |AATT 294, 322, 452, 527, 685, 901, 1196, 1583
TspRI NNCA[CG]TGNN| 610
XmnI GAANN|NNTTC 442, 701, 902


Click here to view TAIR data

>AT1G19700.1 length:1617
ATGGCAGTTT ATTACACAAG TAATGTCGGT TGTTACCAGC AAGAACCAAT 
50
CTTTCTCAAC CATCAACAAC AAAACCAACA AGCTTCTTCT TCATCCGCCG 
100
CCGCTTCTTT CACCGTCACC GGCGGCGATA CTGTTCGAAA CGAGATGGTT 
150
TTTATCCCAC CAACCACCAC AGGAGACGTT GTAACAGGAA ACGGTACCGT 
200
TTCAAGCAGC GATCTAAGCT TTCACGATGG TCAAGGACTG TCTTTGAGCC 
250
TTGGTACTCA GATCTCTGTT GCTCCGTTTC ACTTTCATCA ATACCAATTG 
300
GGGTTTACTA GTCAGAATCC TTCAATTTCA GTCAAGGAAA CGTCACCGTT 
350
TCATGTGGAT GAGATGAGTG TGAAGAGCAA AGAAATGATC TTGTTGGGTC 
400
AATCTGATCC TTCCTCTGGT TATGCTGGTA ATGGTGGGAA TGGCTTCTAC 
450
AACAATTATC GGTATAATGA GACATCAGGA GGGTTTATGA GCAGCGTTCT 
500
GCGTTCTCGG TATCTTAAAC CTGCTCAGAA TTTGCTTGAT GAAGTGGTTA 
550
GTGTCAAGAA AGAACTAAAC CAAATGGGGA AGAAGAAGAT GAAAGTTAAT 
600
GACTTTAACA GTGGTTCTAA GGAGATAGAA GGAGGAGGTG GTGAGTTATC 
650
GAGTGATTCG AATGGGAAAT CGATTGAGTT ATCTACAATT GAACGTGAAG 
700
AGCTTCAGAA CAAGAAGAAC AAGCTTTTAA CAATGGTTGA TGAGGTAGAT 
750
AAAAGATATA ACCAATATTA CCATCAAATG GAAGCATTAG CTTCATCATT 
800
TGAGATAGTA GCAGGACTTG GATCAGCTAA GCCTTACACA TCAGTTGCTC 
850
TCAACAGAAT CTCTCGCCAT TTTCGTGCTC TTCGCGACGC AATAAAGGAA 
900
CAAATTCAGA TTGTTAGAGA AAAACTTGGG GAGAAAGGAG GAGAGTCGTT 
950
GGATGAGCAA CAAGGAGAGA GGATACCAAG GTTGAGGTAT TTAGATCAAC 
1000
GGTTGAGACA GCAAAGAGCT TTGCATCAAC AGCTTGGAAT GGTTCGACCT 
1050
GCTTGGAGAC CTCAAAGAGG TCTTCCTGAA AACTCTGTCT CTGTTCTTCG 
1100
CGCTTGGCTC TTTGAACATT TCCTTCATCC ATATCCGAAA GAATCTGAGA 
1150
AAATCATGCT TGCAAAGCAG ACAGGATTGT CAAAGAACCA GGTTGCTAAT 
1200
TGGTTCATAA ACGCGAGAGT TCGTCTGTGG AAACCGATGA TCGAAGAAAT 
1250
GTATAAAGAA GAGTTTGGTG ATGAATCTGA GTTACTAATC TCCAAATCTT 
1300
CCCAAGAACC CAACAGCACA AACCAAGAAG ACTCCTCATC GCAGCAGCAG 
1350
CAGCAGCAAG AGAACAACAA CAACAGCAAC CTCGCTTATT CATCTGCAGA 
1400
CACAACAAAC ATTGTCTTCT CATCAGAAAC CAAACCAGAT CGTGTTCTAG 
1450
GCAATGATAA CGACCCACAG CAACAACAGA TAAACCGCTC ATCGGATTAC 
1500
GACACTCTGA TGAACTATCA CGGGTTTGGT GTTGATGATT ACCGTTACAT 
1550
TAGCGGAAGC AACCAGCAAG AAAGCAGATT CTCCAATTCC CATCACTTAC 
1600
ACGACTTTGT TGTGTGA
1650

>AT1G19700.1 longest ORF length:538
MAVYYTSNVG CYQQEPIFLN HQQQNQQASS SSAAASFTVT GGDTVRNEMV 
50
FIPPTTTGDV VTGNGTVSSS DLSFHDGQGL SLSLGTQISV APFHFHQYQL 
100
GFTSQNPSIS VKETSPFHVD EMSVKSKEMI LLGQSDPSSG YAGNGGNGFY 
150
NNYRYNETSG GFMSSVLRSR YLKPAQNLLD EVVSVKKELN QMGKKKMKVN 
200
DFNSGSKEIE GGGGELSSDS NGKSIELSTI EREELQNKKN KLLTMVDEVD 
250
KRYNQYYHQM EALASSFEIV AGLGSAKPYT SVALNRISRH FRALRDAIKE 
300
QIQIVREKLG EKGGESLDEQ QGERIPRLRY LDQRLRQQRA LHQQLGMVRP 
350
AWRPQRGLPE NSVSVLRAWL FEHFLHPYPK ESEKIMLAKQ TGLSKNQVAN 
400
WFINARVRLW KPMIEEMYKE EFGDESELLI SKSSQEPNST NQEDSSSQQQ 
450
QQQENNNNSN LAYSSADTTN IVFSSETKPD RVLGNDNDPQ QQQINRSSDY 
500
DTLMNYHGFG VDDYRYISGS NQQESRFSNS HHLHDFVV
550