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| Locus | Common name | Short description |
| AT1G19850 | IAA24, ARF5, MP | MONOPTEROS, indole-3-acetic acid inducible 24, AUXIN RESPONSE FACTOR 5, Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (.1) |
>AT1G19850.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvrII, BaeI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstZ17I, BtrI, BtsI, ClaI, EagI, EarI, EciI, EcoNI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, NaeI, , NarI, NgoMIV, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SwaI, TliI, Tth111I, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 1294, 2369 |
| AciI | C|CGC | 575, 861, 1293, 1949, 2368 |
| AflII | C|TTAAG | 2689 |
| AflIII | A|CPuPyGT | 1281 |
| AluI | AG|CT | 111, 159, 209, 532, 543, 588, 709, 901, 931, 963, 1215, 1256, 1344, 1512, 1619, 1713, 1750, 1836, 1918, 2183, 2218, 2222, 2432, 2451, 2510, 2523, 2658 |
| AvaI | C|PyCGPuG | 1139, 2514 |
| AvaII | G|G[AT]CC | 2024, 2630 |
| BalI | TGG|CCA | 1548 |
| BamHI | G|GATCC | 1059 |
| BclI | T|GATCA | 1755 |
| BfaI | C|TAG | 929, 1326, 1442, 2034, 2078, 2181, 2220 |
| BglII | A|GATCT | 603 |
| BsaAI | PyAC|GTPu | 527, 1280 |
| BsaBI | GATNN|NNATC | 1058 |
| BsaJI | C|CNNGG | 642, 1150, 1907, 2575 |
| BsaWI | [AT]|CCGG[AT] | 1932 |
| BsiHKAI | G[AT]GC[AT]|C | 1580 |
| BslI | CCNNNNN|NNGG | 204, 432, 1300, 1331, 1809 |
| BsmI | GAATGCN| | 438, 2471 |
| BsoBI | C|PyCGPuG | 1139, 2514 |
| Bsp1286I | G[GAT]GC[CAT]|C | 1580 |
| BspHI | T|CATGA | 609, 1959 |
| BsrDI | GCAATGNN| | 2299 |
| BsrFI | Pu|CCGGPy | 144 |
| BsrGI | T|GTACA | 1746 |
| BsrI | ACTGGN| | 2281 |
| BssKI | |CCNGG | 1012, 1074, 1116, 1670, 1728, 1823, 1907, 2401 |
| BstF5I | GGATGNN| | 677, 739, 1111, 1121, 2594, 2655 |
| BstNI | CC|[AT]GG | 1074, 1116, 1670, 1823, 1907 |
| BstUI | CG|CG | 1294, 2369 |
| BstXI | CCANNNNN|NTGG | 2154 |
| BstYI | Pu|GATCPy | 603, 1059, 2082 |
| Bsu36I | CC|TNAGG | 1200 |
| BtgI | C|CPuPyGG | 1150, 2575 |
| Cac8I | GCN|NGC | 168, 178, 242, 771, 1666, 2221, 2674 |
| Cfr10I | [AG]|CCGG[TC] | 144 |
| DdeI | C|TNAG | 212, 310, 376, 403, 441, 463, 518, 566, 812, 934, 961, 968, 1081, 1199, 1402, 1489, 1594, 1975, 2386, 2626 |
| DpnI | GA-CH3|TC | 267, 602, 693, 922, 1058, 1754, 1799, 1875, 2081, 2209, 2415, 2570, 2684 |
| DpnII | |GATC | 267, 602, 693, 922, 1058, 1754, 1799, 1875, 2081, 2209, 2415, 2570, 2684 |
| DraI | TTT|AAA | 2437 |
| DraIII | CACNNN|GTG | 1689 |
| DrdI | GACNNNN|NNGTC | 1211 |
| EaeI | Py|GGCCPu | 1270, 1548 |
| EcoO109I | PuG|GNCCPy | 181, 2025 |
| EcoRV | GAT|ATC | 1156 |
| Fnu4HI | GC|NGC | 534, 575, 843, 849, 1343, 1409, 1460, 1499, 1618, 2018, 2324 |
| HaeIII | GG|CC | 179, 1071, 1269, 1365, 1547, 2239 |
| HhaI | GCG|C | 2670 |
| HinP1I | G|CGC | 2670 |
| HindIII | A|AGCTT | 2433, 2524, 2659 |
| HinfI | G|ANTC | 383, 717, 1008, 1045, 1204, 1290, 1559, 1630, 1813, 1911, 1935, 2232 |
| HpaII | C|CGG | 143, 1011, 1727, 1872, 1931, 2400 |
| Hpy188I | TCN|GA | 156, 296, 377, 402, 1193, 1338, 1401, 1488, 1721, 1778, 1797, 2039, 2374 |
| Hpy99I | CG[AT]CG| | 1738 |
| HpyCH4III | ACN|GT | 358, 868, 940, 1518, 1686, 1793, 1984, 2100 |
| HpyCH4IV | A|CGT | 526, 1210, 1279 |
| HpyCH4V | TG|CA | 175, 473, 487, 535, 825, 1315, 1407, 1458, 1497, 1616, 2016, 2227, 2471, 2603 |
| MboI | |GATC | 267, 602, 693, 922, 1058, 1754, 1799, 1875, 2081, 2209, 2415, 2570, 2684 |
| MfeI | C|AATTG | 2420 |
| MscI | TGG|CCA | 1548 |
| MseI | T|TAA | 51, 1707, 2436, 2679, 2688 |
| MslI | CAPyNN|NNPuTG | 173, 833 |
| MspA1I | C[AC]G|C[GT]G | 815, 1919, 1951 |
| MspI | C|CGG | 143, 1011, 1727, 1872, 1931, 2400 |
| MwoI | GCNNNNN|NNGC | 581, 849, 909, 2226, 2602 |
| N.BstNBI | GAGTCNNNN|N | 388, 1635 |
| NciI | CC|[CG]GG | 1012, 1728, 2401 |
| NcoI | C|CATGG | 1150, 2575 |
| NdeI | CA|TATG | 1313 |
| NheI | G|CTAGC | 2221 |
| NlaIII | CATG| | 344, 506, 608, 1027, 1149, 1396, 1637, 1958, 2346, 2473, 2574 |
| NlaIV | GGN|NCC | 1059 |
| NsiI | ATGCA|T | 1316, 2472 |
| NspI | PuCATG|Py | 2474 |
| PflMI | CCANNNN|NTGG | 432, 1809 |
| PpuMI | PuG|G[AT]CCPy | 2025 |
| PspGI | |CC[AT]GG | 1074, 1116, 1670, 1823, 1907 |
| PstI | CTGCA|G | 536 |
| PvuII | CAG|CTG | 1919 |
| RsaI | GT|AC | 132, 422, 870, 937, 1024, 1385, 1745, 2283 |
| Sau3AI | |GATC | 267, 602, 693, 922, 1058, 1754, 1799, 1875, 2081, 2209, 2415, 2570, 2684 |
| Sau96I | G|GNCC | 180, 2024, 2630 |
| ScrFI | CC|NGG | 1012, 1074, 1116, 1670, 1728, 1823, 1907, 2401 |
| SfcI | C|TPuPyAG | 536, 671 |
| SmlI | C|TPyPuAG | 200, 1645, 1990, 2192, 2689 |
| SspI | AAT|ATT | 1417 |
| StuI | AGG|CCT | 1366, 2240 |
| StyI | C|C[AT][AT]GG | 1150, 2575 |
| Taqƒ¿I | T|CGA | 598, 695, 1158, 2466 |
| TfiI | G|A[AT]TC | 717, 1008, 1045, 1290, 1559, 1813, 1911, 1935 |
| TseI | G|C[AT]GC | 534, 843, 849, 1343, 1409, 1460, 1499, 1618, 2018 |
| Tsp45I | |GT[CG]AC | 361, 493, 746, 2427 |
| Tsp509I | |AATT | 290, 2267, 2356, 2419 |
| TspRI | NNCA[CG]TGNN| | 361, 522, 1521, 1689, 2134, 2281 |
| XbaI | T|CTAGA | 2079 |
Click here to view TAIR data
>AT1G19850.1 length:2709
ATGATGGCTT CATTGTCTTG TGTTGAAGAC AAGATGAAAA CAAGTTGTTT | 50 |
GGTTAATGGT GGAGGAACTA TAACAACAAC AACATCTCAA TCTACCTTGC | 100 |
TTGAAGAGAT GAAGCTGTTG AAAGACCAGT CAGGTACAAG AAAGCCGGTA | 150 |
ATAAACTCGG AGCTATGGCA CGCTTGTGCA GGCCCTTTGG TGTGTCTCCC | 200 |
TCAAGTTGGG AGCTTAGTGT ATTACTTCTC ACAAGGTCAT AGCGAGCAGG | 250 |
TTGCTGTTTC AACCAGAAGA TCAGCAACAA CACAAGTTCC TAATTATCCG | 300 |
AACCTTCCAT CTCAGTTGAT GTGTCAAGTC CATAATGTTA CTCTTCATGC | 350 |
TGACAAAGAC AGTGACGAAA TCTATGCTCA GATGAGTCTT CAACCTGTTC | 400 |
ACTCTGAGAG AGATGTGTTC CCTGTACCAG ACTTTGGAAT GCTGAGAGGA | 450 |
AGTAAGCACC CGACTGAGTT TTTCTGCAAA ACACTTACTG CAAGTGACAC | 500 |
AAGCACACAT GGAGGTTTCT CAGTGCCACG TAGAGCTGCA GAGAAGCTAT | 550 |
TTCCACCATT GGACTACTCA GCACAGCCGC CAACGCAAGA GCTTGTAGTT | 600 |
CGAGATCTTC ATGAGAATAC TTGGACATTT CGCCATATCT ACCGAGGGCA | 650 |
ACCAAAGAGA CATCTCCTAA CTACAGGATG GAGTTTGTTC GTTGGATCGA | 700 |
AGAGATTGAG AGCTGGGGAT TCTGTTTTGT TCATCAGGGA TGAGAAGTCA | 750 |
CAACTTATGG TCGGTGTTAG GCGTGCCAAT CGCCAACAAA CAGCACTTCC | 800 |
TTCATCAGTT CTCTCAGCGG ATAGTATGCA CATCGGTGTT CTTGCTGCTG | 850 |
CTGCTCACGC AACCGCCAAC CGTACTCCTT TTTTGATATT CTATAATCCA | 900 |
AGAGCTTGTC CAGCAGAGTT CGTGATCCCT CTAGCTAAGT ACCGTAAGGC | 950 |
GATATGCGGG TCTCAGCTCT CAGTTGGTAT GAGATTTGGA ATGATGTTTG | 1000 |
AAACTGAAGA TTCCGGGAAA CGAAGGTACA TGGGAACTAT TGTTGGAATC | 1050 |
AGCGATTTGG ATCCGTTGAG ATGGCCTGGT TCTAAGTGGC GTAACCTTCA | 1100 |
GGTAGAATGG GATGAGCCTG GATGTAATGA TAAACCTACT CGGGTCAGTC | 1150 |
CATGGGATAT CGAAACACCT GAAAGTCTCT TCATTTTTCC TTCTCTGACC | 1200 |
TCAGGACTCA AACGTCAGCT CCATCCATCT TACTTTGCTG GTGAAACTGA | 1250 |
ATGGGGTAGC TTGATAAAAC GGCCACTTAT ACGTGTTCCT GATTCCGCGA | 1300 |
ATGGGATTAT GCCATATGCA TCTTTCCCTA GTATGGCTTC GGAGCAGCTT | 1350 |
ATGAAAATGA TGATGAGGCC TCACAACAAC CAAAATGTAC CATCTTTCAT | 1400 |
GTCTGAGATG CAGCAGAATA TTGTAATGGG GAATGGAGGT TTGCTAGGAG | 1450 |
ATATGAAGAT GCAGCAACCC CTGATGATGA ACCAGAAATC TGAGATGGTG | 1500 |
CAGCCACAAA ACAAGCTAAC AGTGAACCCA TCTGCTTCTA ATACGAGTGG | 1550 |
CCAAGAACAG AATCTTTCAC AGAGTATGAG TGCTCCTGCT AAACCTGAGA | 1600 |
ACTCTACACT CTCTGGTTGC AGCTCTGGTA GAGTCCAACA TGGACTTGAG | 1650 |
CAGTCAATGG AACAGGCAAG CCAGGTTACT ACATCCACAG TGTGTAATGA | 1700 |
GGAAAAGGTT AATCAGCTAC TTCAGAAACC GGGTGCTTCG TCGCCTGTAC | 1750 |
AAGCTGATCA ATGTCTTGAC ATTACTCATC AGATTTACCA ACCACAGTCT | 1800 |
GATCCAATAA ATGGATTCTC TTTCCTGGAA ACTGATGAGC TGACATCACA | 1850 |
AGTCTCTTCC TTCCAGTCTC TTGCCGGATC ATACAAGCAA CCATTCATTC | 1900 |
TATCCTCCCA GGATTCTTCA GCTGTTGTGT TACCGGATTC CACAAACTCA | 1950 |
CCGCTGTTTC ATGATGTGTG GGACACTCAG TTGAACGGTC TCAAGTTTGA | 2000 |
CCAGTTCAGT CCCTTGATGC AGCAGGACCT TTATGCTAGT CAGAATATCT | 2050 |
GTATGAGTAA TAGCACAACC AGTAACATTC TAGATCCTCC ACTCTCAAAC | 2100 |
ACAGTCCTTG ATGACTTCTG TGCCATCAAA GACACTGATT TCCAGAACCA | 2150 |
CCCTTCTGGT TGTTTGGTTG GAAACAACAA CACTAGCTTT GCTCAAGATG | 2200 |
TCCAGTCGCA GATCACATCA GCTAGCTTTG CAGACTCACA GGCCTTCTCT | 2250 |
CGCCAAGATT TTCCAGATAA TTCTGGAGGC ACTGGTACAT CTTCAAGCAA | 2300 |
TGTTGATTTT GATGATTGTA GTCTGCGGCA AAATAGTAAA GGCTCATCAT | 2350 |
GGCAGAAAAT TGCGACACCC CGCGTCCGAA CCTACACTAA GGTTCAAAAA | 2400 |
ACCGGGTCAG TCGGGAGATC AATTGATGTC ACAAGCTTTA AAGACTACGA | 2450 |
GGAGCTAAAA TCTGCTATCG AATGCATGTT TGGATTGGAA GGACTACTAA | 2500 |
CTCACCCACA AAGCTCGGGT TGGAAGCTTG TATATGTTGA TTATGAGAGT | 2550 |
GATGTTCTGC TTGTAGGAGA TGATCCATGG GAAGAGTTTG TGGGATGCGT | 2600 |
AAGGTGCATA AGGATATTGT CGCCAACTGA GGTCCAGCAG ATGAGTGAAG | 2650 |
AAGGGATGAA GCTTTTGAAC AGCGCAGGCA TTAACGATCT TAAGACTTCT | 2700 |
GTTTCATAA | 2750 |
>AT1G19850.1 longest ORF length:902
MMASLSCVED KMKTSCLVNG GGTITTTTSQ STLLEEMKLL KDQSGTRKPV | 50 |
INSELWHACA GPLVCLPQVG SLVYYFSQGH SEQVAVSTRR SATTQVPNYP | 100 |
NLPSQLMCQV HNVTLHADKD SDEIYAQMSL QPVHSERDVF PVPDFGMLRG | 150 |
SKHPTEFFCK TLTASDTSTH GGFSVPRRAA EKLFPPLDYS AQPPTQELVV | 200 |
RDLHENTWTF RHIYRGQPKR HLLTTGWSLF VGSKRLRAGD SVLFIRDEKS | 250 |
QLMVGVRRAN RQQTALPSSV LSADSMHIGV LAAAAHATAN RTPFLIFYNP | 300 |
RACPAEFVIP LAKYRKAICG SQLSVGMRFG MMFETEDSGK RRYMGTIVGI | 350 |
SDLDPLRWPG SKWRNLQVEW DEPGCNDKPT RVSPWDIETP ESLFIFPSLT | 400 |
SGLKRQLHPS YFAGETEWGS LIKRPLIRVP DSANGIMPYA SFPSMASEQL | 450 |
MKMMMRPHNN QNVPSFMSEM QQNIVMGNGG LLGDMKMQQP LMMNQKSEMV | 500 |
QPQNKLTVNP SASNTSGQEQ NLSQSMSAPA KPENSTLSGC SSGRVQHGLE | 550 |
QSMEQASQVT TSTVCNEEKV NQLLQKPGAS SPVQADQCLD ITHQIYQPQS | 600 |
DPINGFSFLE TDELTSQVSS FQSLAGSYKQ PFILSSQDSS AVVLPDSTNS | 650 |
PLFHDVWDTQ LNGLKFDQFS PLMQQDLYAS QNICMSNSTT SNILDPPLSN | 700 |
TVLDDFCAIK DTDFQNHPSG CLVGNNNTSF AQDVQSQITS ASFADSQAFS | 750 |
RQDFPDNSGG TGTSSSNVDF DDCSLRQNSK GSSWQKIATP RVRTYTKVQK | 800 |
TGSVGRSIDV TSFKDYEELK SAIECMFGLE GLLTHPQSSG WKLVYVDYES | 850 |
DVLLVGDDPW EEFVGCVRCI RILSPTEVQQ MSEEGMKLLN SAGINDLKTS | 900 |
VS | 950 |