fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G20600 AP2/B3-like transcriptional factor family protein (.1)

>AT1G20600.1 genomic map

>>Show CDS map




Uncut enzymes: AscI, NcoI, NheI, NotI, PacI, PstI, SalI
Name Recognition sequence Cut positions
ApaI GGGCC|C 1207
BamHI G|GATCC 4479
BglII A|GATCT 47, 1932, 4776, 5787
EcoRI G|AATTC 4005
EcoRV GAT|ATC 1311, 1390, 1892, 5747, 5841
HindIII A|AGCTT 1282, 2554, 2793, 2890, 4672, 4835, 6427, 6666, 6763
HpaI GTT|AAC 767
KpnI GGTAC|C 1239
NdeI CA|TATG 2626, 3787, 6499
PvuII CAG|CTG 2103, 5976
SacI GAGCT|C 982
SmaI CCC|GGG 1210
SpeI A|CTAGT 1406, 4155, 5181
StyI C|C[AT][AT]GG 22, 2211
XbaI T|CTAGA 2785, 4464, 5592, 5648, 6658
XhoI C|TCGAG 2044, 5929


Click here to view TAIR data

>AT1G20600 genomic sequence (4000-4641,5055-5126,) length:6805
TCGAGGATAT TACTTATACC GCCAAGgtaa tcaactgata ctctgaagat 
50
ctcgattcat tttatatgag actgtttttt gaaccatagg tttcgtttca 
100
atttcattgt ttgatgttag tgctgttaaa accctagatt tggtgagctg 
150
ggcaaatttg ctgggaaatt ttagattgct tcttatttta agttctaagt 
200
gagattaaga atccttgaaa ttcatgctgt ataaaaccct agaatgcgtg 
250
atcctgccag tgacattaga taaattttga ctgtagggta tagtctcctc 
300
tgattggtta aacttattat tgatctatag gacacatcaa taactgagaa 
350
gaaaggttct acgtttgtgc tttgtaacgt tttatccaaa gcctaagttg 
400
ctctttagga atacagtggt caaatgtgaa ttatctgaag tatgcaggtc 
450
ttaaagcgtc ctcttatttg cggattattg tgccgtatgg gttttgagtc 
500
aacctgtaat tattgggaaa agaactacat gtagttctca attcagaaag 
550
tcttaactct ttaagtgtta ttcttcatag tatacataaa taatctgtca 
600
acttaatggg tttgtttgtt aattgtcact gaacttttgt tttgggtttt 
650
ccaatgctgt gttacagGAT GGTAAGGTAT CACAGCTTGA GCATGTCTTC 
700
ATTCGAGGCA GTAAAGTCAG gtgctgtact tgtttccttg tttatgtaat 
750
tcatgggatc attcttgtta accctagctg tttagtaatt gacctgcgga 
800
tatatcttga cagGTTTATG GTCATACCAG ACATTCTCAA ACATGCTCCA 
850
ATGTTCAAGC GGTTAGATGC TAGAATCAAG gtatatatgc tttttgaacc 
900
ctggatgcag aatgatatta ggatctctat acatatctcc aacaaacatc 
950
ttaccttact tgcttaatca atgtagGGAA AGAGCTCATC ACTGGGTGTT 
1000
GGCAGAGGTA GAGGTGCAAT GCGAGGGAAA gtaagttcac cctctctctc 
1050
ttatgattta gtgctcatga atgcaatgtt aggaagtttt atggaacttg 
1100
ttaagatgtt caaatccttg ttatccctta atggtttgtt tcttctttgt 
1150
cactactaat ggttagattc ttgaatcttt gtgatattat cttaaagCCG 
1200
GCTGCCGGGC CCGGGCGTGG AACTGGAGGA AGGGGAGCGG TACCACCTGT 
1250
GAGGAGATGA ttgattttac gctcaacatg taagctttga ttctgggata 
1300
gtctttctgt gatatccagg tgaaagccgc ctttcttggt tctgtcatta 
1350
atgctttaga gaacactgta aaaccaaaca agagagagag atatccagat 
1400
gcactactag ttctgtattt tgggttacca agatgtttga atcattgaca 
1450
agttttcgtt gtgatctatt ttcttctttg cgcattctcc atttctgaca 
1500
gtagatgagt aaaacaaagt acattgtttt cataaaggtc ttaataagac 
1550
taagatcaga aaacaaagtt ggtcatttat aacattaata atataagcta 
1600
gaaaataata ttgtacttgt attttcaaca tgtaaaacct tgtctactgc 
1650
tattttccca aattatccaa aaaatttcca aaatgacttg tacaatattt 
1700
agtctataaa agtttagttc cagagtacca gcaaacacca aaacgacttg 
1750
tagaagaata tttgatggag tgtagaggtt cggttcctga gtaatattaa 
1800
ccaaaatggg tcatagagtt tcctgagtat tttacaacga ttatacatga 
1850
aattagtagg atcaattcac aagttgaata taggaaagca tgatatcaaa 
1900
agattctttt tattctctct caagtgaaga aagatcttaa agaccttaaa 
1950
aagagaagaa ccgaaccaac cattgtacat atcccatttg ggcaacttgc 
2000
tctatctctc tttctctcac actctttttg ttcaaaagaa aaactcgagt 
2050
tatgTCATAT TAGATTCTTA TTATAGTTTT TTCCTCCCTT AAAGCAGAAA 
2100
CCCAGCTGGT TCACTTCTTG CAGCATGAAA GAACTTAGAT GTGTTGTACT 
2150
TCCTGTGAGC TTCCCTGTTC CTGCCTTGTG ATGAAAAGCA ACCATCTTTC 
2200
TCGCACATGC Cctaggaaaa aacacaaaac ccattgtcag gattccaaaa 
2250
tctcatgtca tcgggttttc aaaaaaattc gaaacaatca atgtatgttc 
2300
ttacAGTAGC TGTTCTTCGT TGTAGCCTGT GTGAAACTCA CAGGTTTTGC 
2350
TCCATTCTTC AAATCCCTTA AGTGTACACT GAGCAGTGTA GATTGCTGAG 
2400
GCCGCCAGCT TAGATGGAAG ATACTCTAGC ATCTCATACT CCACAAGGCA 
2450
AAGCTCGATC ATAAAGAATG ATAAAATCTC AAGctgacac cacaattgca 
2500
tataccacac cgatttagat attaggcctg atggtttccg gacataatga 
2550
ttcaagcttt tttagttagg gagatatata cCTTCTTGTC AGATTGGGCA 
2600
GCTTTGAGAA ATCGTTTCAT GAAAACATAT GGAGTTGGTA GAGAGAAATT 
2650
GAATTGCAAG GTGTTGGCCA TTAGCTTCTC ctgcaataga aaccaaaaac 
2700
aggtaaattc aactatgaag catcaaccag tggtagttaa tgatcaagac 
2750
aaagttgtgt attcacCATA TCTAGCACTT CTCTTCTAGA GTAAGCTTTG 
2800
TCAGAGATCA AGATGAGATC ATCTACCACT GGAACTGAAA CTTCTTCATA 
2850
TTTACATGCG AGCAACAAAG CAGTAACACC AACAAGCTGA AGCTTTTTCC 
2900
TCACGATTTG ATGAACCGCA AGGAATctgt cgatgacaaa aatcttctta 
2950
gtttttccct aaagacaaga atgaacaaac ataacttgta ttgagataac 
3000
aagaactcaa gttacataag aagtcgttca agtagagcat atacatgtat 
3050
gatatagaaa tttatacGAC ATggtatcaa gaaacagagc tttttattat 
3100
aaaaaattca tcatcagcta ttagagaggt ctctagtcta tatctctcat 
3150
tgacgttttt gaaaaacaga gcagtatttt tacagagtta aaataattat 
3200
tttgtcgatt aaaaaagtta aatgtgtttt tattaattac aactagatga 
3250
acacccatgc gtagcatcgg tttttgtttt ttgaattgtc ggaaaaatat 
3300
gattatggtt ttttttttat tttgatgttc aatataatta ttactataat 
3350
tcatatctat ttaatataat tattaatttt tatgattagt ttcatctata 
3400
actcgaaata tcaattctac tataatatga aaatttatat atctattttt 
3450
ctaatattta actatcataa tcacatacaa caacaatata tgatagattg 
3500
ataaaatgaa tgtagttata ttacttatgt gttttgaaac ttgtctaact 
3550
taattataac aaacaatttt ttattccata tatttttttg tcatctagta 
3600
aacaatcaca tcatgatatg ctagtaattt aagtcaacac tttaattatt 
3650
ttcttttgca tataacaata taatgtctta tgtttttttt ggtatgtcta 
3700
atgtgtcaga tgactattac gtgaaaaaaa ttgtttatca atattaccaa 
3750
gttatcagaa cgcacaaaaa tatacagaaa gaaggtcata tgataaaatc 
3800
atattcacaa aacgtaataa taaaaaaata tctaactaaa attactaaac 
3850
taatatgagg tggccaactt tcatatatat gatttaaatg gaaaatcaaa 
3900
gtataaaagg aaattgattt gctagaaaga aggaaaaaaa caaaccctat 
3950
agataggttc ttcagcaagg taagatagag agaacgtgag agatcgatcA 
4000
TGGCGAATTC AACAGGTAAA CCGACAAGTT CAACACAAGA AGATGAAGAA 
4050
GTTACATACA TATTAGCACA ATTGATGCAA GATGTTATGG ATCGTGAAGA 
4100
GGATATAGAT GATGAAGACG ATATAGATGA TGAGGTTGCG TCCCTTCCAT 
4150
TATTACTAGT AAGCCAAGCT AATCAAAAGC AGTCTAGGAA GAGGGAAGAA 
4200
AAAACTGAAA AAAATCAACC TAAGAGGGTT AAGAATCAGA ACATCATGAA 
4250
AATAAATATC CATGACTTTT CAGAAGAAAC TCTGAGGTTA ATTGAGGATT 
4300
GGTACAACGC TGAACTCGAT CCACAGGATA TATTCGGCGA TGATGAGGTG 
4350
ACGAGGCGAT TCAGCCGACC GATAAAGAAG CAGTTGATGT CGAGCGACGT 
4400
CGATACAGAT CAAAGCAGGC TCATGTTATC GAAGGAGCAA GTGAAGGAGA 
4450
AGATGCTTCC TTTTCTAGAA GAATCAGAGG ATCCGGTAAA GGGGGTTGAT 
4500
GTTTCGGTGT ATGGACCAGA CGGGGAAGTT CAACAGATGA AGTTCAAGAT 
4550
GTGGAATGGG GATAAAACAC CTGTCTTAAC TTCAGGGTGG ATGCAGTTTG 
4600
TGGCAGATTA TGGTCTTTTG AAGACTTCTG ATTTTGTCAC Tgtttggatg 
4650
tttaggcaca taaagactcg aaagctttgc tttgctattc actacgttac 
4700
attttcttta agaaattaac taatcgagtg ggatgatctt gaagactact 
4750
gctttcttga atccaaatta gggtgagatc ttcaagaatt aatacagtgg 
4800
tcaaatgtga atagtctcaa gtatgcaggt cttaaagctt cgtcttcttt 
4850
gcgaataatg tgctgtatgg gttttgaatg aacctgtaat tattgggaaa 
4900
gaactacctg tagtttttta gttcagaaag tctttaactc ttttaatgtg 
4950
ttattgttca taagtattca taaataatct gtcaacttaa tgggtttgtt 
5000
tattaataat tgtcacttaa cttttgtttt cggtttttca ttgctatgtt 
5050
acagGATGGT AAGGTATCAC AGCTTGAGCA TGTCTTCATT CGAGGCAGCA 
5100
AAGTCAGGTG CTGCAACACT TCTTAGagaa cactgtaaaa ccaaacaaag 
5150
gagaacaaga gagatatgtc cagatgcact actagttctg tattttgggt 
5200
taccaagatg tttgaatcat tgacaagttt tcgttgtgat ctattttctt 
5250
ctttgcgcat tctccatttc tgacagtaga tgagtaaaac aaagtacatt 
5300
gttttcataa aggtcttaat aagactaaga tcagaaaaca aagataaatt 
5350
gaaggaacaa gattatgaaa tactagaagt aatgattata tcctccttca 
5400
ataaagactg caatactgta gactttgagt tgtctaaata acgtagtcta 
5450
tatggtcatt tataacatta atatataagc tataaaagaa tattgtactt 
5500
gtattttcat catgtaaaaa ccttgtcaac tgcaattttc ccaaattaca 
5550
atccaaaaaa ttgccatgta cttgtagaat atttgatagg gtctagagat 
5600
tcagttccag agtaccaaaa cgacatgtag aagaatattt gattcagtct 
5650
agaggttcag ctcccgagta atattaacca aactggatca tagattttcc 
5700
tgagtctata caagaatcga ttcacaagtt gaatatagga aagcatgata 
5750
tcagaagatt ctttttattc tctctcaagt gaagaaagat ctaaagacct 
5800
tagaaagaga agaatacact ctttttgggc tacttgccat gatatctaaa 
5850
gatccattct tctcccattt tgggcaactt gctctactat ctctctttct 
5900
ctcacactct ttttgttcta aagaaaaact cgagttaagt catattagat 
5950
tcttattaat aTTAAATCAG AAACCCAGCT GGTTCAGTTC TTGCAGCATG 
6000
ACAGAACTTA GATGTGTTGT ACTTTCTGTG AACTCCTGTG AGCTTCCCTG 
6050
TTCCTGCCTT GTGATGGAAA GCAACCATCT TTCTCGCACA TGCCctagaa 
6100
aaaacacaaa aacccactgt caggatacca aaatctcatg tcatggggtt 
6150
ttcaaaaaaa tcaatgtatg ttcttacAGT AGCTGTTTTT CGTTGTAGCC 
6200
TGTGTGAAAC TCACAGGTTT TGCTCCATTC TTCAAATCCC TTAAGTGTAC 
6250
ACTGAGCAGT GTAGATTGCT GAGGCCGCCA GCTTAGATGG AAGATACTCT 
6300
AGCATCTCAT ACTCCACAAG GCAAAGCTCG ATCATAAAGA ATGATAAAAT 
6350
CTCAAGctga aaccacaatt gcatatacca caccgattta gatattaggc 
6400
ctgatggttt ccggatataa tgattcaagc ttttttagtt agggagatat 
6450
atacCTTCTT GTCAGATTGG GCAGCTTTGA GAAATCGTTT CATGAAAACA 
6500
TATGGAGTTG GTAGAGAGAA ATTGAATTGC AAGGTGTTGG CCATTAGCTT 
6550
CTCctgcaat agaaaccaaa aacaggtaaa ttcaactatg aagcatcaac 
6600
cagtggtagt taatgatcaa gacaaagttg tgtattcacC ATATCTAGCA 
6650
CTTCTCTTCT AGAGTAAGCT TTGTCAGAGA TCAAGATGAG ATCATCTACC 
6700
ACTGGAACTG AAACTTCTTC ATATTTACAT GCAAGCAACA AAGCAGTAAC 
6750
ACCAACAAGC TGAAGCTTTT TCCTCACGAT TTGATGAACC GCAAGGAATC 
6800
TGTCG
6850