fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G20700 ATWOX14, WOX14 WUSCHEL related homeobox 14 (.1)

>AT1G20700.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, ClaI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, HpyCH4IV, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 418
AccII(FnuDII) CG|CG 373
AluI AG|CT 303, 381, 442, 478
ApoI Pu|AATTPy 619
AvaII G|G[AT]CC 448
BanII GPuGCPy|C 443
BfaI C|TAG 273
BsiHKAI G[AT]GC[AT]|C 443
BslI CCNNNNN|NNGG 219, 588
Bsp1286I G[GAT]GC[CAT]|C 443
BsrFI Pu|CCGGPy 437
BstUI CG|CG 373
BstYI Pu|GATCPy 59
Cac8I GCN|NGC 441
Cfr10I [AG]|CCGG[TC] 437
DdeI C|TNAG 94, 587
DpnI GA-CH3|TC 58, 124, 233, 370, 400
DpnII |GATC 58, 124, 233, 370, 400
DrdI GACNNNN|NNGTC 157, 384
EcoNI CCTNN|NNNAGG 588
EcoRV GAT|ATC 267
Fnu4HI GC|NGC 461
HaeIII GG|CC 210
HinfI G|ANTC 110, 287, 350, 537, 552
HpaII C|CGG 436
Hpy188I TCN|GA 236, 290, 308, 387
Hpy99I CG[AT]CG| 329, 354, 376, 472
HpyCH4III ACN|GT 67
MboI |GATC 58, 124, 233, 370, 400
MfeI C|AATTG 423
MseI T|TAA 631
MspI C|CGG 436
MwoI GCNNNNN|NNGC 135
N.BstNBI GAGTCNNNN|N 557
NlaIII CATG| 392
NruI TCG|CGA 374
PflMI CCANNNN|NTGG 219
PshAI GACNN|NNGTC 415
SacI GAGCT|C 443
Sau3AI |GATC 58, 124, 233, 370, 400
Sau96I G|GNCC 448
SmlI C|TPyPuAG 316
Taqƒ¿I T|CGA 269, 352
TfiI G|A[AT]TC 110, 350, 537
TseI G|C[AT]GC 461
Tsp45I |GT[CG]AC 148, 507
Tsp509I |AATT 422, 618


Click here to view TAIR data

>AT1G20700.1 length:636
ATGGTAAAAA AAAAAAAGGA AAAGGAGAAA AGCAAAGAAA TAGAGGAGAT 
50
GGATAGAGAG ATCCAAAACG GTGCGTATAG TGGGAGAGTG ATGACTGAGG 
100
AGCAGATGGA GATTCTCCGT AAGCAGATCG CCGTTTACGC CGTTATTTGT 
150
GACCAACTCG TCCTCCTCCA CAACTCCCTC TCTTCTTACC ATCCACTCTC 
200
ATCAGGAGTG AGGCCAATGG TTGGCGGATA CTTTGATCCG ATGGGGGCAT 
250
CGTCAAGTTC TCATAGGATA TCGACTAGGC ATCGGTGGAC TCCGACTTCA 
300
ACACAGCTTC AGATACTTGA GAGCATTTAC GACGAAGGAA GTGGAACACC 
350
GAATCGACGG AGGATTAGAG AGATCGCGAC GGAGCTGTCT GAACATGGAC 
400
AGATCACGGA GACAAATGTC TACAATTGGT TTCAAAACCG GCGAGCTCGG 
450
TCCAAACGAA AGCAGCCTCA AACGACGACA GCTAATGGTC AGGCTGACGA 
500
TGTGGCGGTG ACAACGGAGG AAAGGAGGAG TTGTGGAGAT TCAGGGGGAT 
550
TAGAGTCTTA TGAGCATATA CTCTTCCCAA GTCCTGACTT AGGGATTGAG 
600
CATTTGTTGA GTATAGGGAA ATTTATGGAG ACTTAA
650

>AT1G20700.1 longest ORF length:211
MVKKKKEKEK SKEIEEMDRE IQNGAYSGRV MTEEQMEILR KQIAVYAVIC 
50
DQLVLLHNSL SSYHPLSSGV RPMVGGYFDP MGASSSSHRI STRHRWTPTS 
100
TQLQILESIY DEGSGTPNRR RIREIATELS EHGQITETNV YNWFQNRRAR 
150
SKRKQPQTTT ANGQADDVAV TTEERRSCGD SGGLESYEHI LFPSPDLGIE 
200
HLLSIGKFME T
250