|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G20710 | WOX13B, WOX10 | WUSCHEL related homeobox 13B, WUSCHEL related homeobox 10 (.1) |
>AT1G20710.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, ApaI, ApaLI, ApoI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstXI, BstYI, Bsu36I, BtrI, Cac8I, Cfr10I, ClaI, DraI, DraIII, EarI, EciI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HindIII, HpaI, HpaII, HphI, HpyCH4IV, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TseI, Tth111I, XbaI, XcmI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 222, 370 |
| AccII(FnuDII) | CG|CG | 306 |
| AciI | C|CGC | 305 |
| AfeI | AGC|GCT | 208 |
| AluI | AG|CT | 105, 394 |
| Aor51HI(Eco47III) | AGC|GCT | 208 |
| AvaI | C|PyCGPuG | 438, 537 |
| AvaII | G|G[AT]CC | 400 |
| BanII | GPuGCPy|C | 395 |
| BsaJI | C|CNNGG | 307 |
| BsiEI | CGPuPy|CG | 458 |
| BsiHKAI | G[AT]GC[AT]|C | 395 |
| BslI | CCNNNNN|NNGG | 171, 549 |
| BsoBI | C|PyCGPuG | 438, 537 |
| Bsp1286I | G[GAT]GC[CAT]|C | 395 |
| BstF5I | GGATGNN| | 49, 451 |
| BstUI | CG|CG | 306 |
| BstZ17I | GTA|TAC | 370 |
| BtgI | C|CPuPyGG | 307 |
| BtsI | GCAGTGNN| | 292 |
| DdeI | C|TNAG | 472 |
| DpnI | GA-CH3|TC | 185, 322 |
| DpnII | |GATC | 185, 322 |
| DrdI | GACNNNN|NNGTC | 109 |
| EaeI | Py|GGCCPu | 458 |
| EagI | C|GGCCG | 458 |
| EcoNI | CCTNN|NNNAGG | 549 |
| Fnu4HI | GC|NGC | 456 |
| HaeII | PuGCGC|Py | 208 |
| HaeIII | GG|CC | 228, 457 |
| HhaI | GCG|C | 207 |
| HinP1I | G|CGC | 207 |
| HincII | GTPy|PuAC | 222 |
| HinfI | G|ANTC | 62, 161, 224, 239, 263, 440, 498, 513, 539 |
| Hpy188I | TCN|GA | 260, 339, 419 |
| Hpy99I | CG[AT]CG| | 390 |
| HpyCH4III | ACN|GT | 19, 335, 530 |
| MboI | |GATC | 185, 322 |
| MseI | T|TAA | 315 |
| MspA1I | C[AC]G|C[GT]G | 307 |
| MwoI | GCNNNNN|NNGC | 87, 453 |
| N.BstNBI | GAGTCNNNN|N | 445, 518, 544 |
| NlaIII | CATG| | 212, 344, 355 |
| PaeR7I | C|TCGAG | 438 |
| SacI | GAGCT|C | 395 |
| SacII | CCGC|GG | 307 |
| SalI | G|TCGAC | 222 |
| Sau3AI | |GATC | 185, 322 |
| Sau96I | G|GNCC | 400 |
| SmlI | C|TPyPuAG | 268, 438 |
| Taqƒ¿I | T|CGA | 221, 232, 437 |
| TfiI | G|A[AT]TC | 161, 263, 498 |
| TliI | C|TCGAG | 438 |
| Tsp45I | |GT[CG]AC | 462 |
| Tsp509I | |AATT | 430 |
| TspRI | NNCA[CG]TGNN| | 292 |
| XhoI | C|TCGAG | 438 |
Click here to view TAIR data
>AT1G20710.1 length:594
ATGGAGCAAG AGAGCCTAAA CGGTAGGTAT GGTAGTAGAG TAATGACGGA | 50 |
TGAACAAATG GAGACTCTTC GTAAGCAAAT CGCCATTTAC GCCGTTCTTT | 100 |
GCGACCAGCT CGTCTTCCTC CACAACTCTC TCTCTTCTGT CCCTCTTCTT | 150 |
TCATCAGGAA TGAATCCAAT GAGAGGTGAG TATTTTGATC CAATGGTGGC | 200 |
ATCGTCAAGC GCTCATGGAA TGTCGACTCG GCCTCGATGG ACTCCTACGA | 250 |
CAACGCAACT TCAGATTCTT GAGAACATTT ACAAGGAAGG CAGTGGAACA | 300 |
CCAAATCCGC GGAGGATTAA AGAGATCACG ATGGAACTGT CTGAACATGG | 350 |
ACAAATCATG GAGAAAAATG TATACCATTG GTTTCAAAAC CGACGAGCTC | 400 |
GGTCCAAACG AAAGCAACCT CCGACAACGA CAATTACCTC GAGTCAGGCG | 450 |
GATGATGCGG CCGTGACAAC AACTGAGGAG AGAGGGAGGT GTGGAGATGA | 500 |
TTCTGGAGGG TTTGAGTCTT ATGAGCATAT ACTGTTCCCG AGTCCTGATT | 550 |
TAGGGATTGA GCATTTGTTG AATAGGGACA AGTTTATAGA CTGA | 600 |
>AT1G20710.1 longest ORF length:197
MEQESLNGRY GSRVMTDEQM ETLRKQIAIY AVLCDQLVFL HNSLSSVPLL | 50 |
SSGMNPMRGE YFDPMVASSS AHGMSTRPRW TPTTTQLQIL ENIYKEGSGT | 100 |
PNPRRIKEIT MELSEHGQIM EKNVYHWFQN RRARSKRKQP PTTTITSSQA | 150 |
DDAAVTTTEE RGRCGDDSGG FESYEHILFP SPDLGIEHLL NRDKFID | 200 |