fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G21340 AtDof1,2 Dof-type zinc finger DNA-binding family protein (.1)

>AT1G21340.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 448
BglII A|GATCT 626, 759
EcoRI G|AATTC 550
EcoRV GAT|ATC 508
HindIII A|AGCTT 79


Click here to view TAIR data

>AT1G21340.1 length:783
ATGTTGCCGT ACATTGGACA CAACAGCTAC CAGCAGCACC AGTTTCCGTT 
50
GCCGGAGATG GAAATTCCGG AGAAGTGGAA GCTTTCTTAC GAACAAGAGG 
100
CTATTACTGC TCCGGCTTGT CCTCGTTGTG CATCGTCCAA CACCAAGTTT 
150
TGTTATTACA ACAACTACAG CTTGTCTCAG CCTAGATACT TCTGCAAGGG 
200
TTGCCGTCGT TACTGGACGA AAGGCGGTTC TCTCCGCAAC ATTCCTGTAG 
250
GTGGAGGCTG TCGCAAGAGA AGTCGAAGCA GACAGAACAG TCACAAAAGG 
300
TTTGGCCGGA ACGAGAATCG GCCAGATGGT CTTATTAACC AAGATGATGG 
350
ATTCCAGTCC AGCCCTCCTG GTTCTGATAT TGATTTGGCT GCGGTTTTCG 
400
CACAATATGT GACTGATCGG AGCCCTTCTA GTACAGATAA TACTACTGGA 
450
TCCGATCAAG ATTCACCGAT AACAACAACC ACTCATGCTT TAGAATCTTT 
500
GAGTTGGGAT ATCTGCCAAG AAACTGATGT GGATCTTGGA TTCTACGGGG 
550
AATTCAATAA TCTAACTCAG AAGACCAAAG AGGATCAAGA AGTATTTGGT 
600
CAGTTTCTCC AAGAAGATCG AGAGGAGATC TTCGAGTTCC AGGGTTTACT 
650
CGATGACAAA GAGATTCAAG AGATCCTGGA ATGCTCATTC TCAGAGGAGC 
700
CAGACCAGTT AGTTTCTCAG GGGAGCTTCA TGATCAATGG TGATAACTGG 
750
AGTTCAACAG ATCTTACCAG GTTCGGGATT TGA
800

>AT1G21340.1 longest ORF length:260
MLPYIGHNSY QQHQFPLPEM EIPEKWKLSY EQEAITAPAC PRCASSNTKF 
50
CYYNNYSLSQ PRYFCKGCRR YWTKGGSLRN IPVGGGCRKR SRSRQNSHKR 
100
FGRNENRPDG LINQDDGFQS SPPGSDIDLA AVFAQYVTDR SPSSTDNTTG 
150
SDQDSPITTT THALESLSWD ICQETDVDLG FYGEFNNLTQ KTKEDQEVFG 
200
QFLQEDREEI FEFQGLLDDK EIQEILECSF SEEPDQLVSQ GSFMINGDNW 
250
SSTDLTRFGI 
300