fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G21570 zinc finger (CCCH-type) family protein

>AT1G21570.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI
Name Recognition sequence Cut positions
SpeI A|CTAGT 409
StyI C|C[AT][AT]GG 1287
XhoI C|TCGAG 324


Click here to view TAIR data

>AT1G21570.1 length:1413
ATGCGACCAT TTAAGCAATC AAAGTTTTCT CTGGTTTGGA CGCAAAATGA 
50
TCCGCAGCCA AGAATGCCCA TAGCTCACAT GCGAAATCAG AATATTGTGC 
100
CGCAACTTGT TCCCTGGAAA AGAGTGACGT ACTGGAGAAG ATTAATGAAC 
150
TCAGTGTCTG CTTTCCGAAA TGGTTCTTCT CTCAACATTA GCCGAAAGTT 
200
GTCAATGATG AGGAAGAGAC ACACAATTTA CACAAGATCA ACTAATGGGT 
250
ATTCCCTCAG AAAATCTAAG GTATTAAGTG TTGGTGGGTC GCATTTAAAA 
300
TGGTCCAAGT CCATTGAGAG AGACTCGAGA AAAGCTAATG AGGAGGCCAC 
350
ATTGGCTGTG GCTGCATACT CAAAGAAAGA AAGTGAAAAG CAATCTGGAC 
400
AAAATAATAC TAGTACGGCG AGCAGAAACC ATCTGGCACG GGAGCGCGTT 
450
TTCAGGTTTG GTTCCCTTCG TTATAAAATG GACTCTTCAA GACGAACTCT 
500
TCAGAGAATA TCTGATGTTG ATTCACCGTG CTCTGGACCT TCTGAAAATG 
550
GAAAGGGTGT GAAAAGACCG TTTATCCCAA AGAGATTGGT GATCGGCAAT 
600
GAAGAATATG TTCGGTTCGG GAATGGTAAC CAGCTTGTCA GAGATCCAAA 
650
GAAACGAACT CGTGTGTTGG CAAATGAGAA AGTCAGATGG AGCCTGCACA 
700
ATGCCCGGTT GCGGTTGGCT AAAAAGAAGA AGTACTGCCA GTTTTTCACA 
750
AGATTTGGGA AATGCAACAA AGATGACGGA AAATGTCCCT ATGTTCATGA 
800
TCCCTCGAAA ATTGCTGTTT GCACCAAATT TTTGAATGGA TTGTGTGCAA 
850
ATGCAAATTG CAAATTGACT CACAAGGTCA TTCCAGAAAG GATGCCTGAT 
900
TGTTCTTATT ATCTGCAAGG CCTATGCAAC AATGAGGCAT GTCCATATAG 
950
GCATGTGCAT GTCAATCCGA TCGCCCCTAT ATGTGATGGG TTTTTAAAGG 
1000
GATACTGTTC CGAAGGAGAC GAGTGTCGGA AGAAGCATTC CTACAACTGC 
1050
CCGGTTTTCG AAGCCACTGG ATCATGCTCT CAAGGATTGA AATGCAAGCT 
1100
CCACCACCCC AAGAACCAAA GCAAAGGAAG AAAGAGAAAA AGAACAAACG 
1150
AACCATCACA GAAAAATGCC CGTAGGCGTT ACTTTAGTTC ACTTCACAAC 
1200
ATCCTTTCCG AGTCTGAGCC AATGGTATTC AATAGGCGTT CTACTGACAG 
1250
TGAAGTTTTT GGAATGGAAA GCCTCGATTT TATAACCCTT GGCACTGCTG 
1300
AGTATGAAGC CGGTGATGAC AATGATCCAG CCACCGTGCA ATCTATCTCC 
1350
AGTGACAGTG AATCACTAAT CTCAATATAC AATCTAATCA CACCAGTAGC 
1400
TCTGATGCAG TAA
1450

>AT1G21570.1 longest ORF length:470
MRPFKQSKFS LVWTQNDPQP RMPIAHMRNQ NIVPQLVPWK RVTYWRRLMN 
50
SVSAFRNGSS LNISRKLSMM RKRHTIYTRS TNGYSLRKSK VLSVGGSHLK 
100
WSKSIERDSR KANEEATLAV AAYSKKESEK QSGQNNTSTA SRNHLARERV 
150
FRFGSLRYKM DSSRRTLQRI SDVDSPCSGP SENGKGVKRP FIPKRLVIGN 
200
EEYVRFGNGN QLVRDPKKRT RVLANEKVRW SLHNARLRLA KKKKYCQFFT 
250
RFGKCNKDDG KCPYVHDPSK IAVCTKFLNG LCANANCKLT HKVIPERMPD 
300
CSYYLQGLCN NEACPYRHVH VNPIAPICDG FLKGYCSEGD ECRKKHSYNC 
350
PVFEATGSCS QGLKCKLHHP KNQSKGRKRK RTNEPSQKNA RRRYFSSLHN 
400
ILSESEPMVF NRRSTDSEVF GMESLDFITL GTAEYEAGDD NDPATVQSIS 
450
SDSESLISIY NLITPVALMQ 
500