Locus |
Common name |
Short description |
AT1G21970 |
AtLEC1, NF-YB9, EMB212, LEC1 |
NUCLEAR FACTOR Y, SUBUNIT B9, LEAFY COTYLEDON 1, EMBRYO DEFECTIVE 212, Histone superfamily protein (.1) |
>AT1G21970.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
364 |
HindIII
| A|AGCTT |
385 |
KpnI
| GGTAC|C |
434 |
NcoI
| C|CATGG |
587 |
SacI
| GAGCT|C |
11 |
StyI
| C|C[AT][AT]GG |
587 |
Click here to view TAIR data
>AT1G21970.1 length:717
ATGGAACGTG GAGCTCCCTT CTCTCACTAT CAGCTACCAA AATCCATCTC | 50 |
TGAATTGAAC TTGGACCAGC ACAGCAACAA CCCAACCCCA ATGACCAGCT | 100 |
CAGTCGTAGT AGCCGGCGCC GGTGACAAGA ACAATGGTAT CGTGGTCCAG | 150 |
CAGCAACCAC CATGTGTGGC TCGTGAGCAA GACCAATACA TGCCAATCGC | 200 |
AAACGTCATA AGAATCATGC GTAAAACCTT ACCGTCTCAC GCCAAAATCT | 250 |
CTGACGACGC CAAAGAAACG ATTCAAGAAT GTGTCTCCGA GTACATCAGC | 300 |
TTCGTGACCG GTGAAGCCAA CGAGCGTTGC CAACGTGAGC AACGTAAGAC | 350 |
CATAACTGCT GAAGATATCC TTTGGGCTAT GAGCAAGCTT GGGTTCGATA | 400 |
ACTACGTGGA CCCCCTCACC GTGTTCATTA ACCGGTACCG TGAGATAGAG | 450 |
ACCGATCGTG GTTCTGCACT TAGAGGTGAG CCACCGTCGT TGAGACAAAC | 500 |
CTATGGAGGA AATGGTATTG GGTTTCACGG CCCATCTCAT GGCCTACCTC | 550 |
CTCCGGGTCC TTATGGTTAT GGTATGTTGG ACCAATCCAT GGTTATGGGA | 600 |
GGTGGTCGGT ACTACCAAAA CGGGTCGTCG GGTCAAGATG AATCCAGTGT | 650 |
TGGTGGTGGC TCTTCGTCTT CCATTAACGG AATGCCGGCT TTTGACCATT | 700 |
ATGGTCAGTA TAAGTGA | 750 |
>AT1G21970.1 longest ORF length:238
MERGAPFSHY QLPKSISELN LDQHSNNPTP MTSSVVVAGA GDKNNGIVVQ | 50 |
QQPPCVAREQ DQYMPIANVI RIMRKTLPSH AKISDDAKET IQECVSEYIS | 100 |
FVTGEANERC QREQRKTITA EDILWAMSKL GFDNYVDPLT VFINRYREIE | 150 |
TDRGSALRGE PPSLRQTYGG NGIGFHGPSH GLPPPGPYGY GMLDQSMVMG | 200 |
GGRYYQNGSS GQDESSVGGG SSSSINGMPA FDHYGQYK | 250 |
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