Locus |
Common name |
Short description |
AT1G22190 |
RAP2.4 |
related to AP2 4, Integrase-type DNA-binding superfamily protein (.1) |
>AT1G22190.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
469 |
HpaI
| GTT|AAC |
615 |
SalI
| G|TCGAC |
460 |
Click here to view TAIR data
>AT1G22190.1 length:786
ATGACAACTT CTATGGATTT TTACAGTAAC AAAACGTTTC AACAATCTGA | 50 |
TCCATTCGGT GGTGAATTAA TGGAAGCGCT TTTACCTTTT ATCAAAAGCC | 100 |
CTTCCAACGA TTCATCCGCG TTTGCGTTCT CTCTACCCGC TCCAATTTCA | 150 |
TACGGGTCGG ATCTCCACTC ATTTTCTCAC CATCTTAGTC CTAAACCGGT | 200 |
CTCAATGAAA CAAACCGGTA CTTCCGCGGC TAAACCGACG AAGCTATACA | 250 |
GAGGAGTGAG ACAACGTCAC TGGGGAAAAT GGGTGGCTGA GATTCGTTTA | 300 |
CCGAGGAATC GAACTCGACT TTGGCTCGGA ACATTCGACA CGGCGGAGGA | 350 |
AGCTGCTTTA GCTTATGACA AGGCGGCGTA TAAGCTCCGA GGAGATTTTG | 400 |
CGCGGCTTAA TTTCCCTGAT CTCCGTCATA ACGACGAGTA TCAACCTCTT | 450 |
CAATCATCAG TCGACGCTAA GCTTGAAGCT ATTTGTCAAA ACTTAGCTGA | 500 |
GACGACGCAG AAACAGGTGA GATCAACGAA GAAGTCTTCT TCTCGGAAAC | 550 |
GTTCATCAAC CGTCGCAGTG AAACTACCGG AGGAGGACTA CTCTAGCGCC | 600 |
GGATCTTCGC CGCTGTTAAC GGAGAGTTAT GGATCTGGTG GATCTTCTTC | 650 |
GCCGTTGTCG GAGCTGACGT TTGGTGATAC GGAGGAGGAG ATTCAGCCGC | 700 |
CGTGGAACGA GAACGCGTTG GAGAAGTATC CGTCGTACGA GATCGATTGG | 750 |
GATTCGATTC TTCAGTGTTC GAGTCTTGTA AATTAG | 800 |
>AT1G22190.1 longest ORF length:261
MTTSMDFYSN KTFQQSDPFG GELMEALLPF IKSPSNDSSA FAFSLPAPIS | 50 |
YGSDLHSFSH HLSPKPVSMK QTGTSAAKPT KLYRGVRQRH WGKWVAEIRL | 100 |
PRNRTRLWLG TFDTAEEAAL AYDKAAYKLR GDFARLNFPD LRHNDEYQPL | 150 |
QSSVDAKLEA ICQNLAETTQ KQVRSTKKSS SRKRSSTVAV KLPEEDYSSA | 200 |
GSSPLLTESY GSGGSSSPLS ELTFGDTEEE IQPPWNENAL EKYPSYEIDW | 250 |
DSILQCSSLV N | 300 |
|