fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G22190 RAP2.4 related to AP2 4, Integrase-type DNA-binding superfamily protein (.1)

>AT1G22190.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 469
HpaI GTT|AAC 615
SalI G|TCGAC 460


Click here to view TAIR data

>AT1G22190.1 length:786
ATGACAACTT CTATGGATTT TTACAGTAAC AAAACGTTTC AACAATCTGA 
50
TCCATTCGGT GGTGAATTAA TGGAAGCGCT TTTACCTTTT ATCAAAAGCC 
100
CTTCCAACGA TTCATCCGCG TTTGCGTTCT CTCTACCCGC TCCAATTTCA 
150
TACGGGTCGG ATCTCCACTC ATTTTCTCAC CATCTTAGTC CTAAACCGGT 
200
CTCAATGAAA CAAACCGGTA CTTCCGCGGC TAAACCGACG AAGCTATACA 
250
GAGGAGTGAG ACAACGTCAC TGGGGAAAAT GGGTGGCTGA GATTCGTTTA 
300
CCGAGGAATC GAACTCGACT TTGGCTCGGA ACATTCGACA CGGCGGAGGA 
350
AGCTGCTTTA GCTTATGACA AGGCGGCGTA TAAGCTCCGA GGAGATTTTG 
400
CGCGGCTTAA TTTCCCTGAT CTCCGTCATA ACGACGAGTA TCAACCTCTT 
450
CAATCATCAG TCGACGCTAA GCTTGAAGCT ATTTGTCAAA ACTTAGCTGA 
500
GACGACGCAG AAACAGGTGA GATCAACGAA GAAGTCTTCT TCTCGGAAAC 
550
GTTCATCAAC CGTCGCAGTG AAACTACCGG AGGAGGACTA CTCTAGCGCC 
600
GGATCTTCGC CGCTGTTAAC GGAGAGTTAT GGATCTGGTG GATCTTCTTC 
650
GCCGTTGTCG GAGCTGACGT TTGGTGATAC GGAGGAGGAG ATTCAGCCGC 
700
CGTGGAACGA GAACGCGTTG GAGAAGTATC CGTCGTACGA GATCGATTGG 
750
GATTCGATTC TTCAGTGTTC GAGTCTTGTA AATTAG
800

>AT1G22190.1 longest ORF length:261
MTTSMDFYSN KTFQQSDPFG GELMEALLPF IKSPSNDSSA FAFSLPAPIS 
50
YGSDLHSFSH HLSPKPVSMK QTGTSAAKPT KLYRGVRQRH WGKWVAEIRL 
100
PRNRTRLWLG TFDTAEEAAL AYDKAAYKLR GDFARLNFPD LRHNDEYQPL 
150
QSSVDAKLEA ICQNLAETTQ KQVRSTKKSS SRKRSSTVAV KLPEEDYSSA 
200
GSSPLLTESY GSGGSSSPLS ELTFGDTEEE IQPPWNENAL EKYPSYEIDW 
250
DSILQCSSLV N
300