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| Locus | Common name | Short description |
| AT1G25280 | AtTLP10 | tubby like protein 10 (.1.2.3) |
>AT1G25280.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AclI, AfeI, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BspDI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BsrI, BssHII, BstAPI, BstBI, BstEII, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XcmI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 773, 1085 |
| AccIII(BspMII) | T|CCGGA | 721 |
| AciI | C|CGC | 450, 898, 937, 1084, 1142 |
| AflII | C|TTAAG | 1302 |
| AflIII | A|CPuPyGT | 255, 761, 1092 |
| AluI | AG|CT | 44, 97, 292, 417, 487, 579, 725, 753, 1122, 1307, 1320 |
| ApaLI | G|TGCAC | 1184 |
| ApoI | Pu|AATTPy | 475, 1080, 1116 |
| AvaI | C|PyCGPuG | 78, 856 |
| BanII | GPuGCPy|C | 754 |
| BclI | T|GATCA | 209 |
| BfaI | C|TAG | 960 |
| BglI | GCCNNNN|NGGC | 1049 |
| BsaJI | C|CNNGG | 367, 533, 573, 597, 1045, 1086 |
| BsaWI | [AT]|CCGG[AT] | 721 |
| BsiHKAI | G[AT]GC[AT]|C | 754, 1184 |
| BsmI | GAATGCN| | 789 |
| BsoBI | C|PyCGPuG | 78, 856 |
| Bsp1286I | G[GAT]GC[CAT]|C | 754, 768, 1184 |
| BspEI | T|CCGGA | 721 |
| BspHI | T|CATGA | 800 |
| BsrDI | GCAATGNN| | 384, 1067 |
| BssKI | |CCNGG | 366, 831 |
| BssSI | C|TCGTG | 374 |
| BstF5I | GGATGNN| | 538 |
| BstNI | CC|[AT]GG | 366, 831 |
| BstUI | CG|CG | 773, 1085 |
| BstYI | Pu|GATCPy | 556 |
| BtgI | C|CPuPyGG | 533, 1086 |
| Cac8I | GCN|NGC | 243, 776, 1323 |
| DdeI | C|TNAG | 100, 582, 1198 |
| DpnI | GA-CH3|TC | 137, 208, 555, 585, 665 |
| DpnII | |GATC | 137, 208, 555, 585, 665 |
| EcoO109I | PuG|GNCCPy | 319, 370 |
| Fnu4HI | GC|NGC | 1040, 1131, 1142, 1164, 1170, 1306 |
| HaeIII | GG|CC | 240, 318, 369, 777 |
| HhaI | GCG|C | 651 |
| HinP1I | G|CGC | 651 |
| HindIII | A|AGCTT | 1321 |
| HinfI | G|ANTC | 80, 386, 891, 964, 1025, 1214 |
| HpaII | C|CGG | 720 |
| Hpy188I | TCN|GA | 161, 574, 583, 969, 1015 |
| Hpy99I | CG[AT]CG| | 783, 887, 989 |
| HpyCH4III | ACN|GT | 1019, 1098 |
| HpyCH4IV | A|CGT | 759, 1090 |
| HpyCH4V | TG|CA | 244, 379, 789, 794, 871, 1062, 1102, 1162, 1183 |
| MboI | |GATC | 137, 208, 555, 585, 665 |
| MseI | T|TAA | 443, 1110, 1301 |
| MspA1I | C[AC]G|C[GT]G | 1086 |
| MspI | C|CGG | 720 |
| MwoI | GCNNNNN|NNGC | 1049, 1170, 1284, 1306 |
| N.BstNBI | GAGTCNNNN|N | 85 |
| NcoI | C|CATGG | 533 |
| NlaIII | CATG| | 254, 532, 799 |
| NlaIV | GGN|NCC | 318 |
| NspI | PuCATG|Py | 255 |
| PaeR7I | C|TCGAG | 78 |
| PciI | A|CATGT | 255 |
| PspGI | |CC[AT]GG | 366, 831 |
| RsaI | GT|AC | 520, 616, 713 |
| SacI | GAGCT|C | 754 |
| SacII | CCGC|GG | 1086 |
| Sau3AI | |GATC | 137, 208, 555, 585, 665 |
| Sau96I | G|GNCC | 318, 369, 777 |
| ScrFI | CC|NGG | 366, 831 |
| SfcI | C|TPuPyAG | 1260 |
| SmlI | C|TPyPuAG | 78, 552, 1151, 1302 |
| StyI | C|C[AT][AT]GG | 533, 597, 1045 |
| Taqƒ¿I | T|CGA | 7, 63, 77, 511, 647, 667, 825, 885, 945 |
| TfiI | G|A[AT]TC | 386, 964, 1025, 1214 |
| TliI | C|TCGAG | 78 |
| TseI | G|C[AT]GC | 1040, 1131, 1145, 1164, 1170, 1306 |
| Tsp45I | |GT[CG]AC | 1095 |
| Tsp509I | |AATT | 236, 474, 814, 1079, 1115 |
| TspRI | NNCA[CG]TGNN| | 392, 664, 794 |
| XbaI | T|CTAGA | 961 |
| XhoI | C|TCGAG | 78 |
Click here to view TAIR data
>AT1G25280.1 length:1338
ATGTCGTTTC GAGGCATTGT TCAAGATTTG AGAGATGGGT TTGGGAGCTT | 50 |
GTCAAGGAGG AGTTTCGATT TTAGGCTCTC GAGTCTTCAT AAAGGGAAAG | 100 |
CTCAGGGTTC TTCGTTCCGT GAGTATTCGT CATCCCGTGA TCTCTTGTCG | 150 |
CCTGTGATAG TTCAGACAAG TAGATGGGCT AATCTTCCTC CAGAGTTACT | 200 |
CTTTGATGTG ATCAAAAGAT TAGAGGAAAG TGAGAGTAAT TGGCCTGCAA | 250 |
GAAAACATGT TGTGGCTTGT GCTTCGGTTT GTCGGTCTTG GAGAGCTATG | 300 |
TGCCAAGAGA TTGTTTTGGG GCCTGAAATC TGTGGGAAAC TCACTTTCCC | 350 |
TGTTTCCCTC AAACAGCCAG GGCCTCGTGA TGCAATGATT CAGTGTTTCA | 400 |
TCAAAAGGGA TAAATCAAAG CTAACATTTC ACCTTTTTCT TTGTTTAAGT | 450 |
CCCGCTCTAT TAGTGGAGAA TGGGAAATTT CTTCTTTCAG CTAAAAGAAC | 500 |
TCGTAGAACT ACTCGAACCG AGTACATTAT CTCCATGGAT GCTGATAACA | 550 |
TCTCAAGATC CAGCAACTCT TACCTCGGAA AGCTCAGATC AAACTTCCTT | 600 |
GGGACAAAGT TCTTGGTGTA CGACACGCAA CCACCACCAA ACACATCTTC | 650 |
GAGCGCACTT ATCACTGATC GAACAAGCCG AAGCAGGTTT CACTCCAGAC | 700 |
GAGTTTCTCC TAAAGTACCA TCCGGAAGCT ACAACATTGC TCAAATCACC | 750 |
TATGAGCTCA ACGTGTTGGG CACACGCGGG CCACGACGAA TGCACTGCAT | 800 |
CATGAACTCC ATCCCAATTT CATCGCTCGA ACCAGGCGGT TCAGTCCCTA | 850 |
ACCAACCCGA GAAACTCGTC CCTGCACCAT ACTCTCTCGA CGACTCATTC | 900 |
CGCAGTAACA TCTCCTTCTC CAAATCATCA TTTGACCACC GCTCCCTCGA | 950 |
TTTCAGCAGT TCTAGATTCT CCGAAATGGG AATATCCTGC GACGACAACG | 1000 |
AAGAAGAAGC GAGTTTCAGA CCGTTGATTC TAAAGAACAA GCAGCCAAGG | 1050 |
TGGCACGAGC AGTTGCAATG CTGGTGTTTG AATTTCCGCG GACGTGTGAC | 1100 |
AGTTGCATCG GTTAAGAATT TCCAGCTTGT AGCAGCAAGA CAGCCGCAGC | 1150 |
CTCAAGGGAC AGGTGCAGCA GCAGCACCAA CAAGTGCACC TGCTCACCCT | 1200 |
GAGCAAGACA AGGTGATTCT CCAGTTTGGT AAAGTAGGGA AAGATATGTT | 1250 |
CACAATGGAC TATAGGTATC CATTATCGGC GTTTCAGGCG TTTGCGATAT | 1300 |
GCTTAAGCAG CTTTGACACC AAGCTTGCTT GTGAATAG | 1350 |
>AT1G25280.1 longest ORF length:445
MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS | 50 |
PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM | 100 |
CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS | 150 |
PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL | 200 |
GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT | 250 |
YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF | 300 |
RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR | 350 |
WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP | 400 |
EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE | 450 |