fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G25280 AtTLP10 tubby like protein 10 (.1.2.3)

>AT1G25280.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 787
SacI GAGCT|C 220
StyI C|C[AT][AT]GG 63, 511
XbaI T|CTAGA 427


Click here to view TAIR data

>AT1G25280.3 length:804
ATGGATGCTG ATAACATCTC AAGATCCAGC AACTCTTACC TCGGAAAGCT 
50
CAGATCAAAC TTCCTTGGGA CAAAGTTCTT GGTGTACGAC ACGCAACCAC 
100
CACCAAACAC ATCTTCGAGC GCACTTATCA CTGATCGAAC AAGCCGAAGC 
150
AGGTTTCACT CCAGACGAGT TTCTCCTAAA GTACCATCCG GAAGCTACAA 
200
CATTGCTCAA ATCACCTATG AGCTCAACGT GTTGGGCACA CGCGGGCCAC 
250
GACGAATGCA CTGCATCATG AACTCCATCC CAATTTCATC GCTCGAACCA 
300
GGCGGTTCAG TCCCTAACCA ACCCGAGAAA CTCGTCCCTG CACCATACTC 
350
TCTCGACGAC TCATTCCGCA GTAACATCTC CTTCTCCAAA TCATCATTTG 
400
ACCACCGCTC CCTCGATTTC AGCAGTTCTA GATTCTCCGA AATGGGAATA 
450
TCCTGCGACG ACAACGAAGA AGAAGCGAGT TTCAGACCGT TGATTCTAAA 
500
GAACAAGCAG CCAAGGTGGC ACGAGCAGTT GCAATGCTGG TGTTTGAATT 
550
TCCGCGGACG TGTGACAGTT GCATCGGTTA AGAATTTCCA GCTTGTAGCA 
600
GCAAGACAGC CGCAGCCTCA AGGGACAGGT GCAGCAGCAG CACCAACAAG 
650
TGCACCTGCT CACCCTGAGC AAGACAAGGT GATTCTCCAG TTTGGTAAAG 
700
TAGGGAAAGA TATGTTCACA ATGGACTATA GGTATCCATT ATCGGCGTTT 
750
CAGGCGTTTG CGATATGCTT AAGCAGCTTT GACACCAAGC TTGCTTGTGA 
800
ATAG
850

>AT1G25280.3 longest ORF length:267
MDADNISRSS NSYLGKLRSN FLGTKFLVYD TQPPPNTSSS ALITDRTSRS 
50
RFHSRRVSPK VPSGSYNIAQ ITYELNVLGT RGPRRMHCIM NSIPISSLEP 
100
GGSVPNQPEK LVPAPYSLDD SFRSNISFSK SSFDHRSLDF SSSRFSEMGI 
150
SCDDNEEEAS FRPLILKNKQ PRWHEQLQCW CLNFRGRVTV ASVKNFQLVA 
200
ARQPQPQGTG AAAAPTSAPA HPEQDKVILQ FGKVGKDMFT MDYRYPLSAF 
250
QAFAICLSSF DTKLACE
300