fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G25310 bHLH108, MEE8 maternal effect embryo arrest 8, basic helix-loop-helix (bHLH) DNA-binding family protein (.1)

>AT1G25310.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 298
PvuII CAG|CTG 131


Click here to view TAIR data

>AT1G25310.1 length:438
ATGAACAAGG ACGAAGTATT TCTTCGGCAA TGGTTTGAGA TACTATACTC 
50
GCTCACTAAT CCAGAGGCGA ATAGTGACTT GCGTAGGATC AACAACGAAA 
100
AAGGTGTAGA GAAAGTAGGG CAAAAGAGGT CAGCTGAGTC GAGGAGAGAA 
150
GGAAAGAAGA AGCGAGTTAA GACACAGTGC GTGATTAAAT CTTCAGACAA 
200
ATCTGATCAT GATACCTTGT TGAAGAAGAA ACGGCGGGAA CGTATAAGAA 
250
GGCAACTAGA AACACTTAAG GAAATTACAC CCAACTGCCC ACAGTCTGAT 
300
ATCAACGCCA TCCTTGATTG CGTTATCGAG TACACGAACA ACTTGCGCCT 
350
TGCACATTAC AAGGGTTCGC AGGGAATATG TGACGACTGG AGACTGTTTA 
400
CTGAAGCTGG TGCCGTTTTG TATTATATAG ATACTTGA
450

>AT1G25310.1 longest ORF length:145
MNKDEVFLRQ WFEILYSLTN PEANSDLRRI NNEKGVEKVG QKRSAESRRE 
50
GKKKRVKTQC VIKSSDKSDH DTLLKKKRRE RIRRQLETLK EITPNCPQSD 
100
INAILDCVIE YTNNLRLAHY KGSQGICDDW RLFTEAGAVL YYIDT
150