fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G25330 HAF, bHLH075, CESTA HALF FILLED, CESTA, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G25330.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions


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>AT1G25330.1 length:672
ATGGCACGGT TTGAGCCATA TAACTATAAT AATGGTCATG ATCCTTTCTT 
50
TGCACACATT AACCAAAATC CAGAGCTAAT AAATCTGGAC TTACCAGCTT 
100
CTACCCCTTC CAGTTTCATG CTTTTCTCCA ATGGAGCTTT AGTTGATGCC 
150
AATCACAATA ATTCTCACTT CTTCCCAAAT TTATTGCACG GTAATACGAG 
200
AAGAAAAGGA AATAAAGAAG AGAGTGGGTC GAAGAGAAGA AGAAAGAGGT 
250
CGGAAGAGGA AGAAGCCATG AATGGAGATG AGACTCAGAA GCCAAAAGAT 
300
GTTGTTCATG TCCGAGCTAA GAGAGGTCAA GCTACTGATA GCCATAGTTT 
350
GGCTGAAAGG GTACGAAGAG AGAAGATCAA TGAAAGGCTG AAATGCTTAC 
400
AAGACCTTGT TCCAGGATGC TACAAGGCAA TGGGAATGGC AGTGATGCTT 
450
GATGTCATCA TAGATTATGT ACGATCACTC CAGAATCAAA TCGAGTTTTT 
500
GTCCATGAAA CTCTCAGCGG CAAGTGCATG TTACGACCTT AATTCTTTGG 
550
ATATTGAGCC AACGGATATA TTTCAGGGAG GGAATATTCA TAGTGCAGCA 
600
GAGATGGAAA GGATTTTAAG AGAAAGCGTT GGAACACAGC CTCCTAATTT 
650
CAGTTCAACA TTACCCTTTT GA
700

>AT1G25330.1 longest ORF length:223
MARFEPYNYN NGHDPFFAHI NQNPELINLD LPASTPSSFM LFSNGALVDA 
50
NHNNSHFFPN LLHGNTRRKG NKEESGSKRR RKRSEEEEAM NGDETQKPKD 
100
VVHVRAKRGQ ATDSHSLAER VRREKINERL KCLQDLVPGC YKAMGMAVML 
150
DVIIDYVRSL QNQIEFLSMK LSAASACYDL NSLDIEPTDI FQGGNIHSAA 
200
EMERILRESV GTQPPNFSST LPF
250