Locus |
Common name |
Short description |
AT1G25340 |
ATMYB116 |
myb domain protein 116 (.1.2) |
>AT1G25340.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
570, 792 |
EcoRV
| GAT|ATC |
325 |
SacI
| GAGCT|C |
256 |
StyI
| C|C[AT][AT]GG |
64, 626 |
XhoI
| C|TCGAG |
73 |
Click here to view TAIR data
>AT1G25340.1 length:852
ATGTCAAATA TAACAAAGAA GAAGTGTAAT GGAAATGAAG AGGGTGCAGA | 50 |
GCAGAGGAAA GGGCCTTGGA CACTCGAGGA AGACACTCTT CTCACCAATT | 100 |
ACATTTCCCA TAACGGTGAA GGCCGATGGA ATCTGCTCGC TAAATCTTCT | 150 |
GGGCTAAAGA GAGCAGGAAA AAGTTGTAGA TTGAGATGGT TGAATTACCT | 200 |
TAAACCCGAC ATAAAGCGTG GGAATCTCAC TCCTCAAGAA CAACTTTTAA | 250 |
TCCTTGAGCT CCATTCTAAA TGGGGTAATA GGTGGTCAAA AATTTCGAAG | 300 |
TATTTACCAG GAAGAACAGA CAACGATATC AAAAACTACT GGAGAACTAG | 350 |
AGTCCAGAAA CAAGCACGCC AGCTCAACAT AGATTCCAAT AGCCACAAGT | 400 |
TCATAGAAGT TGTTCGTAGC TTTTGGTTTC CAAGACTGAT CAACGAGATT | 450 |
AAAGACAACT CATACACCAA CAATATTAAA GCTAATGCTC CTGATTTACT | 500 |
TGGACCAATT TTACGAGACA GCAAAGATTT GGGTTTCAAC AACATGGATT | 550 |
GTTCCACTTC CATGTCAGAA GATCTCAAGA AAACTTCACA ATTCATGGAT | 600 |
TTTTCTGATC TTGAAACCAC AATGTCCTTG GAAGGATCAC GAGGGGGTAG | 650 |
TAGTCAATGT GTGAGTGAGG TTTATAGCTC CTTCCCTTGC CTAGAGGAGG | 700 |
AGTACATGGT GGCCGTTATG GGCAGTTCAG ACATTTCAGC ATTGCATGAT | 750 |
TGTCACGTGG CTGATTCCAA GTACGAGGAT GATGTGACAC AAGATCTAAT | 800 |
GTGGAACATG GATGACATTT GGCAGTTTAA CGAGTATGCA CACTTTAATT | 850 |
AG | 900 |
>AT1G25340.1 longest ORF length:283
MSNITKKKCN GNEEGAEQRK GPWTLEEDTL LTNYISHNGE GRWNLLAKSS | 50 |
GLKRAGKSCR LRWLNYLKPD IKRGNLTPQE QLLILELHSK WGNRWSKISK | 100 |
YLPGRTDNDI KNYWRTRVQK QARQLNIDSN SHKFIEVVRS FWFPRLINEI | 150 |
KDNSYTNNIK ANAPDLLGPI LRDSKDLGFN NMDCSTSMSE DLKKTSQFMD | 200 |
FSDLETTMSL EGSRGGSSQC VSEVYSSFPC LEEEYMVAVM GSSDISALHD | 250 |
CHVADSKYED DVTQDLMWNM DDIWQFNEYA HFN | 300 |
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