fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G25550 myb-like transcription factor family protein (.1)

>AT1G25550.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SmaI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 379, 723
KpnI GGTAC|C 876
PstI CTGCA|G 500
SacI GAGCT|C 112
SalI G|TCGAC 540
SpeI A|CTAGT 223, 553
XbaI T|CTAGA 72


Click here to view TAIR data

>AT1G25550.1 length:1035
ATGATGATGT TCAAGAGCGG TGACATGGAT TACACCCAGA AAATGAAGAG 
50
ATGTCACGAA TATGTAGAAG CTCTAGAAGA AGAACAAAAA AAGATTCAAG 
100
TCTTTCAACG TGAGCTCCCT TTATGTTTAG AACTTGTAAC CCAAGCTATC 
150
GAGTCATGTC GGAAGGAGTT ATCGGAATCT TCAGAACATG TTGGCGGCCA 
200
GTCAGAATGT TCTGAGCGGA CAACTAGTGA ATGCGGCGGT GCCGTGTTTG 
250
AAGAGTTTAT GCCAATCAAG TGGAGTTCTG CTTCATCTGA TGAAACCGAT 
300
AAAGATGAAG AAGCTGAGAA AACTGAGATG ATGACCAATG AAAATAACGA 
350
TGGTGATAAG AAGAAATCGG ATTGGCTTAG ATCTGTTCAA TTGTGGAACC 
400
AATCACCAGA TCCACAACCT AATAATAAGA AACCGATGGT AATTGAAGTC 
450
AAACGCAGCG CTGGTGCGTT TCAACCGTTT CAAAAGGAGA AACCTAAGGC 
500
TGCAGATTCT CAACCACTTA TTAAAGCAAT TACTCCGACG TCGACGACGA 
550
CAACTAGTTC CACGGCGGAA ACCGTCGGGG GTGGAAAAGA GTTTGAGGAG 
600
CAGAAACAAT CTCATTCGAA TAGGAAGCAA AGACGTTGCT GGTCACCGGA 
650
GTTACACCGC AGATTCTTGC ACGCGCTTCA ACAACTTGGT GGATCACATG 
700
TTGCTACGCC TAAGCAGATT AGAGATCTTA TGAAGGTCGA TGGTTTAACT 
750
AATGACGAAG TTAAAAGTCA TTTACAGAAA TATAGATTGC ATACAAGAAG 
800
ACCAGCTACT CCGGTAGTAA GGACCGGTGG TGAAAATCCA CAACAACGGC 
850
AGTTTATGGT GATGGAAGGC ATTTGGGTAC CTTCACACGA TACAACTAAT 
900
AATAGAGTTT ACGCTCCTGT GGCGACACAA CCGCCGCAAT CTTCAACGTC 
950
GGGAGAGAGA AGCAATCGGG GTTGCAAATC TCCCGCAACA TCTTCTACTA 
1000
CTACACACAC ACCACACCTT CTTCCTCTTT CATAA
1050

>AT1G25550.1 longest ORF length:344
MMMFKSGDMD YTQKMKRCHE YVEALEEEQK KIQVFQRELP LCLELVTQAI 
50
ESCRKELSES SEHVGGQSEC SERTTSECGG AVFEEFMPIK WSSASSDETD 
100
KDEEAEKTEM MTNENNDGDK KKSDWLRSVQ LWNQSPDPQP NNKKPMVIEV 
150
KRSAGAFQPF QKEKPKAADS QPLIKAITPT STTTTSSTAE TVGGGKEFEE 
200
QKQSHSNRKQ RRCWSPELHR RFLHALQQLG GSHVATPKQI RDLMKVDGLT 
250
NDEVKSHLQK YRLHTRRPAT PVVRTGGENP QQRQFMVMEG IWVPSHDTTN 
300
NRVYAPVATQ PPQSSTSGER SNRGCKSPAT SSTTTHTPHL LPLS
350