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| Locus | Common name | Short description |
| AT1G25560 | EDF1, TEM1 | TEMPRANILLO 1, ETHYLENE RESPONSE DNA BINDING FACTOR 1, AP2/B3 transcription factor family protein (.1) |
>AT1G25560.1 CDS map
>>Show genomic map
Uncut enzymes: Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvI, BcgI, BciVI, BclI, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, , NarI, NciI, NcoI, NdeI, NheI, NlaIII, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AatII | GACGT|C | 111, 607, 988 |
| AccI | GT|[AC][TG]AC | 16, 488 |
| AccII(FnuDII) | CG|CG | 347, 353, 567, 646 |
| AciI | C|CGC | 101, 346, 352 |
| AflIII | A|CPuPyGT | 794 |
| AluI | AG|CT | 8, 195, 250, 310, 430, 615 |
| AlwNI | CAGNNN|CTG | 771 |
| AvaI | C|PyCGPuG | 1022 |
| AvaII | G|G[AT]CC | 876 |
| BanII | GPuGCPy|C | 251 |
| BbvCI | CC|TCAGC | 230 |
| BfaI | C|TAG | 915 |
| BglI | GCCNNNN|NGGC | 405 |
| BglII | A|GATCT | 1018 |
| BsaAI | PyAC|GTPu | 191, 793 |
| BsaHI | GPu|CGPyC | 111, 175, 358, 397, 607, 988 |
| BsaJI | C|CNNGG | 348, 803 |
| BsaWI | [AT]|CCGG[AT] | 874, 911, 921 |
| BsiEI | CGPuPy|CG | 351 |
| BsiHKAI | G[AT]GC[AT]|C | 251 |
| BsiWI | C|GTACG | 542 |
| BslI | CCNNNNN|NNGG | 711, 808 |
| BsoBI | C|PyCGPuG | 1022 |
| Bsp1286I | G[GAT]GC[CAT]|C | 251 |
| BsrFI | Pu|CCGGPy | 105, 669, 815, 844, 884 |
| BsrI | ACTGGN| | 773, 902 |
| BstF5I | GGATGNN| | 693 |
| BstUI | CG|CG | 347, 353, 567, 646 |
| BstYI | Pu|GATCPy | 1018 |
| BtgI | C|CPuPyGG | 348 |
| Cac8I | GCN|NGC | 105, 1062 |
| Cfr10I | [AG]|CCGG[TC] | 105, 669, 815, 844, 884 |
| DdeI | C|TNAG | 229, 253, 433 |
| DpnI | GA-CH3|TC | 436, 867, 1017 |
| DpnII | |GATC | 436, 867, 1017 |
| EaeI | Py|GGCCPu | 351 |
| EagI | C|GGCCG | 351 |
| Fnu4HI | GC|NGC | 139, 148, 312, 349 |
| HaeIII | GG|CC | 350 |
| HhaI | GCG|C | 566 |
| HinP1I | G|CGC | 566 |
| HincII | GTPy|PuAC | 502, 798, 952 |
| HindIII | A|AGCTT | 196 |
| HinfI | G|ANTC | 39, 162, 186, 343, 402, 695, 833, 949 |
| HpaI | GTT|AAC | 502 |
| HpaII | C|CGG | 104, 668, 814, 843, 873, 883, 910, 920 |
| Hpy188I | TCN|GA | 36, 165, 254, 704, 926, 946 |
| Hpy99I | CG[AT]CG| | 76, 109, 152, 176, 205, 356, 395, 509, 538, 551, 605, 679, 706, 986 |
| HpyCH4III | ACN|GT | 22, 591, 622, 766, 930 |
| HpyCH4IV | A|CGT | 32, 110, 190, 539, 606, 792, 987 |
| MboI | |GATC | 436, 867, 1017 |
| MfeI | C|AATTG | 889 |
| MseI | T|TAA | 501, 723, 822 |
| MslI | CAPyNN|NNPuTG | 334 |
| MspA1I | C[AC]G|C[GT]G | 9, 348 |
| MspI | C|CGG | 104, 668, 814, 843, 873, 883, 910, 920 |
| MwoI | GCNNNNN|NNGC | 145, 281, 405 |
| N.BstNBI | GAGTCNNNN|N | 191, 954 |
| NaeI | GCC|GGC | 105 |
| NgoMIV | G|CCGGC | 105 |
| NlaIV | GGN|NCC | 758, 812 |
| NotI | GC|GGCCGC | 352 |
| PflFI | GACN|NNGTC | 186, 361 |
| PflMI | CCANNNN|NTGG | 808 |
| PvuII | CAG|CTG | 9 |
| RsaI | GT|AC | 27, 288, 541 |
| SacI | GAGCT|C | 251 |
| SacII | CCGC|GG | 348 |
| Sau3AI | |GATC | 436, 867, 1017 |
| Sau96I | G|GNCC | 876 |
| SfcI | C|TPuPyAG | 126 |
| SgrAI | CPu|CCGGPyG | 106 |
| SmlI | C|TPyPuAG | 380 |
| StyI | C|C[AT][AT]GG | 803 |
| Taqƒ¿I | T|CGA | 113, 177, 206, 582, 838, 861 |
| TfiI | G|A[AT]TC | 39, 162, 343, 402, 695, 833 |
| TseI | G|C[AT]GC | 148, 312 |
| Tsp45I | |GT[CG]AC | 188, 363 |
| Tsp509I | |AATT | 888 |
| TspRI | NNCA[CG]TGNN| | 902 |
| Tth111I | GACN|NNGTC | 186, 361 |
Click here to view TAIR data
>AT1G25560.1 length:1086
ATGGAATACA GCTGTGTAGA CGACAGTAGT ACAACGTCAG AATCTCTCTC | 50 |
CATCTCTACT ACTCCAAAGC CGACAACGAC GACGGAGAAG AAACTCTCTT | 100 |
CTCCGCCGGC GACGTCGATG CGTCTCTACA GAATGGGAAG CGGCGGAAGC | 150 |
AGCGTCGTTT TGGATTCAGA GAACGGCGTC GAGACCGAGT CACGTAAGCT | 200 |
TCCTTCGTCG AAATATAAAG GCGTTGTGCC TCAGCCTAAC GGAAGATGGG | 250 |
GAGCTCAGAT TTACGAGAAG CATCAGCGAG TTTGGCTCGG TACTTTCAAC | 300 |
GAGGAAGAAG AAGCTGCGTC TTCTTACGAC ATCGCCGTGA GGAGATTCCG | 350 |
CGGCCGCGAC GCCGTCACTA ACTTCAAATC TCAAGTTGAT GGAAACGACG | 400 |
CCGAATCGGC TTTTCTTGAC GCTCATTCTA AAGCTGAGAT CGTGGATATG | 450 |
TTGAGGAAAC ACACTTACGC CGATGAGTTT GAGCAGAGTA GACGGAAGTT | 500 |
TGTTAACGGC GACGGAAAAC GCTCTGGGTT GGAGACGGCG ACGTACGGAA | 550 |
ACGACGCTGT TTTGAGAGCG CGTGAGGTTT TGTTCGAGAA GACTGTTACG | 600 |
CCGAGCGACG TCGGGAAGCT GAACCGTTTA GTGATACCGA AACAACACGC | 650 |
GGAGAAGCAT TTTCCGTTAC CGGCGATGAC GACGGCGATG GGGATGAATC | 700 |
CGTCTCCGAC GAAAGGCGTT TTGATTAACT TGGAAGATAG AACAGGGAAA | 750 |
GTGTGGCGGT TCCGTTACAG TTACTGGAAC AGCAGTCAAA GTTACGTGTT | 800 |
GACCAAGGGC TGGAGCCGGT TCGTTAAAGA GAAGAATCTT CGAGCCGGTG | 850 |
ATGTGGTTTG TTTCGAGAGA TCAACCGGAC CAGACCGGCA ATTGTATATC | 900 |
CACTGGAAAG TCCGGTCTAG TCCGGTTCAG ACTGTGGTTA GGCTATTCGG | 950 |
AGTCAACATT TTCAATGTGA GTAACGAGAA ACCAAACGAC GTCGCAGTAG | 1000 |
AGTGTGTTGG CAAGAAGAGA TCTCGGGAAG ATGATTTGTT TTCGTTAGGG | 1050 |
TGTTCCAAGA AGCAGGCGAT TATCAACATC TTGTGA | 1100 |
>AT1G25560.1 longest ORF length:361
MEYSCVDDSS TTSESLSIST TPKPTTTTEK KLSSPPATSM RLYRMGSGGS | 50 |
SVVLDSENGV ETESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN | 100 |
EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM | 150 |
LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT | 200 |
PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK | 250 |
VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI | 300 |
HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG | 350 |
CSKKQAIINI L | 400 |