fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G26590 C2H2-like zinc finger protein (.1)

>AT1G26590.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 616
EcoRI G|AATTC 18, 86, 102, 504
HindIII A|AGCTT 983
PvuII CAG|CTG 1028
SacI GAGCT|C 393


Click here to view TAIR data

>AT1G26590.1 length:1086
ATGGAGGAAG GGAAAGAGAA TTCGTTTTTG TGCAAGTACT GTTACAAGAC 
50
GTTTCCTTCT GGGAAAGCAC TCGGTGGTCA CATTAGAATT CATACGAACG 
100
AGAATTCAGT TGGTTACAAT GGCAATAAGA AGAAGAGGTT GGTGGATCAG 
150
AGAAAGATGA TGGCTCAGAA ACATAAGCAA CAACAACAAG TTGGTTGCAG 
200
AGAATGTGGT AGAGTGTTCG TTTCTTTGAA AGCTCTTAGA GGTCACATGG 
250
CTTGTCACGG TGAGGTAAAG AAGATGTTGA TGGATGATAA TAGCCAATCT 
300
GATACTGAAA GTGAGACTTC CTCAGCTCCT ATGAGGAAAA GATCCAAGAG 
350
GGTGGTCATG AAACAATCAA ATTCTGAATC TTTGAGTAAT GGGAGCTCGT 
400
CTTTTGGTTC TGAGATTGAC CAAGAACGTA GGGATGGGGC TTATAATTTG 
450
ATGATGTTGT CGAGTGATTC TAGTAGTTTC AAGAAAAGAC GTAACATGGT 
500
GATGAATTCT CTTGGTGAGT CATCTGACAA CAACTCTGCG ATTGTTGAGA 
550
ATAAGTCATC TTCAGGGGAT GAGTTTAAGA TCATGAATGT GAAGAATGCA 
600
GTAGATGACC AATGGAGATC TGCTGATGAT GATGGAGTTA GTCTCTGTGA 
650
TTCAGATGGC TCTGATTCTG ATTACTTCAT GAATGGTCCA AGTAAGTCGG 
700
AGTCAGACAT TTCTGTTGAC AGGAACACTG GATTTGGATC TGGATTCAAC 
750
AACTCATTGA TCAGGTTCAG GAATAGTAAT GAGGGAGGAA CAAAGTATGA 
800
GCTGAGCAAA AGCAAGAGAG CCTTGTTTTC TTATGAAACT GATTCATGTG 
850
CAGACACAAA CAGCAAGATT CATCATAGGT TCAAAGATAG CAAATCCTCA 
900
ATGGTTAAGA AAGAAGGTGG TGAGAAGGTG AAGAGCAAAG GTCATGAGTG 
950
CCCAATTTGC TTCAGGATGT TCAAATCAGG CCAAGCTTTA GGTGGTCACA 
1000
AGAGATCACA TTCCATTGCA AACCACGCAG CTGAAATGCG TAACCAAATC 
1050
GATCTCTATC TTCCTGTTTC GGATACTGAT GAATGA
1100

>AT1G26590.1 longest ORF length:361
MEEGKENSFL CKYCYKTFPS GKALGGHIRI HTNENSVGYN GNKKKRLVDQ 
50
RKMMAQKHKQ QQQVGCRECG RVFVSLKALR GHMACHGEVK KMLMDDNSQS 
100
DTESETSSAP MRKRSKRVVM KQSNSESLSN GSSSFGSEID QERRDGAYNL 
150
MMLSSDSSSF KKRRNMVMNS LGESSDNNSA IVENKSSSGD EFKIMNVKNA 
200
VDDQWRSADD DGVSLCDSDG SDSDYFMNGP SKSESDISVD RNTGFGSGFN 
250
NSLIRFRNSN EGGTKYELSK SKRALFSYET DSCADTNSKI HHRFKDSKSS 
300
MVKKEGGEKV KSKGHECPIC FRMFKSGQAL GGHKRSHSIA NHAAEMRNQI 
350
DLYLPVSDTD E
400