fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G26610 C2H2-like zinc finger protein (.1)

>AT1G26610.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 874
EcoRI G|AATTC 102
HindIII A|AGCTT 1235
PvuII CAG|CTG 107


Click here to view TAIR data

>AT1G26610.1 length:1368
ATGGAGCAGT TCAAAGAGAG GAAGTTTGTT TGTAAGTTCT GTAGCAAGAG 
50
GTTTCCTTGT GGGAAATCAC TTGGAGGTCA CATCAGAACT CACATGAATG 
100
AGAATTCAGC TGATTCAGAT GAAGATGAGG CTGATAAGCT CAAGATGATT 
150
GATGAAAATG GTGGTCAATC TAGTTATGGT CTGAGAGAGA ATCCTAAAAA 
200
GAACAAGAGG TTTGTGGATC ACAGACAGAT TATGGCTCTG AAACAGCAGC 
250
AGCAGCAGCA ACAACTTCAA GAGCTGCGTC GTTGCAGAGA ATGTGGTAAA 
300
GGTTTTGTTT CTTCTAAAGC TCTTTGTGGT CACATGGCTT GTCACTCTGA 
350
GAGAGAGAAG ATTGTTATGG ATAGTCAATC TGATACTGAG GCTTCTTCCT 
400
CTCCTATCAG AAGAAGATCC AAGAGAGTTG TTGTGAAACC TCACCACAAA 
450
GCTGCTTTTG TAGTTGGTGG TAATGGTATT ATGAATCAAT CTATTTCAGC 
500
TTCTTCTGAT GCTTCTGAGA TTGAGCCTGA ACAGGAGGAA ATGGCAAGGT 
550
CTTTGATGAT GCTTTCGAGG GATTCTAGTT TTAAGAAAGG ACATAACTCT 
600
TTGGCTGAGT CATCTGACAA CAACTCTGTG ATTCTTGAGA CTAAGTCATC 
650
TTCAGGTGAG CAGGTTAAGA TGTTCAATGT GAAGAATGTT GAAGAGTTAT 
700
GTAAGAAGAA CAAACTTGTA GTTGATAACC AGATGAGGTC TGGTGAAGAA 
750
AATGGTGATG TTCATTATGA TTCAGATAAT TCTGACTCTG GCTACTTCAG 
800
GAATGGACCA AAGAAGTTGG ACTCAGATGT TTCTGTTGAT GGGTTCTTTA 
850
GGAACAAAAC AATAATGGGA TCTGGATCCG GATTCAACAG CTCCCCAACA 
900
AAACAAGATA GGGACATGAA CAGATTCAGG AAGGAATGGT ATAAGGAAGG 
950
AGGGTCAGGG TCAGGATCAG GATCAGGTCG TTCTTCTACA AAGTATGATC 
1000
TGAGGAAAAG CAAAAGAGGT TTTCCTTCTC ATGGTCGTAA GAAAATCAAG 
1050
TATGAGTTCA CTGAATCTGT CTATGACAGT GGTGAGCATA GCTTGGAAAC 
1100
TGACTCTTGT GCGGACACAA ACAGAACTAT CAAGATTCAT AGTAAGTCTC 
1150
CAATGGTTAA GAAAGCAAAC GGTGCAAAGA AGAAAAGCAA AGGTCACGAG 
1200
TGTCCGATTT GCTTCAGGGT GTTCAAATCA GGACAAGCTT TAGGAGGTCA 
1250
CAAGAGATCA CATTTCATTG GGAATCAAGA ACACAGGACT TTGGTGATTC 
1300
AACATCAAGT AGCTCATGAG ATGCATACAC TCATCGATCT CAATCTTCCT 
1350
GCTCCTATTG ATGAATGA
1400

>AT1G26610.1 longest ORF length:455
MEQFKERKFV CKFCSKRFPC GKSLGGHIRT HMNENSADSD EDEADKLKMI 
50
DENGGQSSYG LRENPKKNKR FVDHRQIMAL KQQQQQQQLQ ELRRCRECGK 
100
GFVSSKALCG HMACHSEREK IVMDSQSDTE ASSSPIRRRS KRVVVKPHHK 
150
AAFVVGGNGI MNQSISASSD ASEIEPEQEE MARSLMMLSR DSSFKKGHNS 
200
LAESSDNNSV ILETKSSSGE QVKMFNVKNV EELCKKNKLV VDNQMRSGEE 
250
NGDVHYDSDN SDSGYFRNGP KKLDSDVSVD GFFRNKTIMG SGSGFNSSPT 
300
KQDRDMNRFR KEWYKEGGSG SGSGSGRSST KYDLRKSKRG FPSHGRKKIK 
350
YEFTESVYDS GEHSLETDSC ADTNRTIKIH SKSPMVKKAN GAKKKSKGHE 
400
CPICFRVFKS GQALGGHKRS HFIGNQEHRT LVIQHQVAHE MHTLIDLNLP 
450
APIDE
500