fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G26680 REM17 transcriptional factor B3 family protein (.1)

>AT1G26680.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 2727
PstI CTGCA|G 1739, 2465
SacI GAGCT|C 1374, 2247
SpeI A|CTAGT 985, 1495
StyI C|C[AT][AT]GG 853, 1360, 2070, 2382
XbaI T|CTAGA 1926


Click here to view TAIR data

>AT1G26680.1 length:2763
ATGGCGGATC AATCTCTTCT ACACTCTCCG ATCAACCCAC ATTTCTTTCA 
50
GCCTATTCTT ACAGAATCTC GCACTCACCT CAACATTCCT GTAGCTTTCT 
100
TCTCGAAGCA TGTTGAAGGA AGAAACAACC AAAACAAGAC TGTGACGCTA 
150
AGATCAGACG CGTCGGATAA AACTTGGTTA GTGAAGATGG ACGGTCTAAA 
200
ACTAACCGAC GGATGGGAAG ATTTTGCCTT TGCACATGAT CTTCGAACTG 
250
GTGACATCGT CGTTTTCAGA CTTGAAGGAG AAATGGTGTT TCATGTCACA 
300
GCTTTAGGAC CAAGCTGTTG CGAGATTCAA TATCATACAT CATCTCACAA 
350
TATCAATGAT GATGATCGTA ATGATCAGAT CAACATTGCT TCAAGAAACA 
400
GTTCAAGAGT GAAGAAGAAT CCACGAAAGA AAGTAGAGTC TTCTTTAGAC 
450
CATTCTCGTT TTGTGGCAAA AGTCTCAGCT TGGTGCCTAA GCAATGATAG 
500
ACTGTATATA CCACTAAGTT TCGCCAGGTT AAACGGTCTG AACAAAATCA 
550
ACAGTAAGAA AATCTATCTT CAGAACGAAG AAGGAAGATC ATGGAAGTTA 
600
GTTTTGAGAC ATGACAAATC AGGCATGCAA ACTTTTGTCC AATCCGGTTG 
650
GAGAAGATTC TGCTCTGAAA ATGGGATTAG GCAAGGTCAA TATACATTCA 
700
AACTTGTCCG AAAATCAGCA CCACCTGTCA TCCGTTTGTG CCGCGCAAAA 
750
GCTAAACCAA AACAAAGATC AGTTGCAGAA TATTCATCAG ACCATTCTTG 
800
TTTTGAGGGA TCTGTCACTC CTTCAAGCCT AAGAAATGAT CTACTGTATC 
850
TTCCAAGGAG CTTTGTGAAC TCAAATCGTC TGGACAAAAG ATGCAGTGAG 
900
ATAGTTTTAA AGAATGAACA GGGAGTAAAA TGGCCTTTAG TTTTGAAACG 
950
TTTCAAATCA GTCACTTATC TCCCAAAAGG CTGGACTAGT TTCTGTCAAG 
1000
TAAACAGGAT CAAAGCAGGA GATTCATTCA AGTTTAAACT GGTTGGAACC 
1050
TGGAAAAAAC CTGTTCTTTC TTTGTGTCCG ACACAATCCA ACAATCACAA 
1100
AACTCCATTA GAGTGTTCAG AAGGTAACAA ATCCGAAGAA AGTGAAGAGG 
1150
ATTGCTTGGA GGTAAAGAAA AAGAAGTATT GGTCGAGATG CAGAGCTTCT 
1200
GTAGAAAACA TGGATGATGA TCAGACCAAC ATTGGAAACA GTTCAAGAAA 
1250
GAAGAGAGTG AGTAAGAATC CAAGAGAGAA AGTAGAGTCT TCATCAGACC 
1300
ATTCTAGTTT TGTGGGATCT GTCAATCCTT CAAGCCTATA CAAAGATCAA 
1350
CTGTATCTTC CAAGGAATTT TGTGAGCTCA AATTTTCTGG ACAAAAGATG 
1400
CAGTGAGATA GTTTTAAAGA ATGAACGGGG AGAAAAAAGG ACTTTAGTTT 
1450
TGAAACACTT CAAAAAAGAC CTTACTTTTC TCAAAAAAGG CTGGACTAGT 
1500
TTCTGTCAAG TAAATAGGAT CAAAGCTGGA GATTCCTTCA AGTTTAAACT 
1550
GGTTGGAACA TGGAACAAAC CTGTTCTTTC TTTGTGCCCT ACAGAAACCA 
1600
ACTATCACAA AACTCCATTA GCGTGTTCAG AGGGTAACAA ATCCGAAGAA 
1650
AGTGAAGAGG AGGGTACTGA AGACAAGAAT ACCTCACAAG ATTGCTTGGA 
1700
GGTGAAGAAA AGGAAGTATT GGTCAACATG CAGAGCTTCT GCAGAGAACA 
1750
TAGATGATGA TCAGACCAAT ATTGGAAACA GTTCAAAAGA GAAGAGAGTG 
1800
AAGAAAAATC CAGTAAAGAA AGCAGAGTCT TCATCAGACC ATTCTAGTTT 
1850
TGTGGCTAAT GTCACAGCTT CAAGCCTAAA CTATGATCGA CTGTATTTAC 
1900
CACTAAGTTT CGTGAGTTCA AACGGTCTAG ATAAAATGAA CGGTAAGGAG 
1950
ATCGTTCTTC TTAATGAAGA AGGACTATCA TGGAAGTTTA ATTTGAAGTA 
2000
CAACCAAGCA GGCAAGCATA CTTATGTCAG ACCTGGTTGG TCAAGATTCT 
2050
GTGATGCAAA TGGGATGAGC CAAGGTCAAC AATTTACATT CAAACTGGTC 
2100
CAAAAACATG GACCACCTGT CATGTATTTG AGCCTCAGTG AACATAGACC 
2150
AAAGTCAGAA TCTTCATCGC ACCGTTCCTA TTTTGTAGGA TCTGTCACTG 
2200
CTTCAAGCAT AAAGAAAGAT AAACTGTATT TATGGAAGAG TTTTGTGAGC 
2250
TCTAATGGTC TGGACAAAGG ATGCAAGAAG ATAATTTTAA AGAATAAATG 
2300
GGGAAGAGAA TGGAAATTAG TCTTGAAACA CTACAAATCA AACTGCTTTA 
2350
CTATTATCAA ACGAGGCTGG ACCAGTTTCT GCCAAGGCAA CGGTTTGAAA 
2400
GCTGGAGATT CCTTCAAGTT CAAACTGGTT GGAACCGGGG AAAAGCCTGT 
2450
TCTTTCTTTG TGCCCTGCAG AATCCAGCCA TGAAAAAATT CCATTAGAGT 
2500
GTCCAGAAGG TATAGATGAT GTCAATTCAC TCTCCTCAAA TCCTAGCAGT 
2550
GGAGATGACA GTAGTAGATC CGAAGAAAGC GAAGAGGAGA ATATGGAAGA 
2600
CAAGAACATC TCACAGGATT GCTTGGAAAC CAAGAAAAGG AAGTATTGCT 
2650
CTTCATCGTC ATATAGTCAA AACCGATTTG TGACATTAAC TCTTACACGG 
2700
TCCGCTTTTC AAACCTATAA ACTGGTAAGC TTCTTCAACA ACTATGCCTC 
2750
AAGGTTGTCT TAG
2800

>AT1G26680.1 longest ORF length:920
MADQSLLHSP INPHFFQPIL TESRTHLNIP VAFFSKHVEG RNNQNKTVTL 
50
RSDASDKTWL VKMDGLKLTD GWEDFAFAHD LRTGDIVVFR LEGEMVFHVT 
100
ALGPSCCEIQ YHTSSHNIND DDRNDQINIA SRNSSRVKKN PRKKVESSLD 
150
HSRFVAKVSA WCLSNDRLYI PLSFARLNGL NKINSKKIYL QNEEGRSWKL 
200
VLRHDKSGMQ TFVQSGWRRF CSENGIRQGQ YTFKLVRKSA PPVIRLCRAK 
250
AKPKQRSVAE YSSDHSCFEG SVTPSSLRND LLYLPRSFVN SNRLDKRCSE 
300
IVLKNEQGVK WPLVLKRFKS VTYLPKGWTS FCQVNRIKAG DSFKFKLVGT 
350
WKKPVLSLCP TQSNNHKTPL ECSEGNKSEE SEEDCLEVKK KKYWSRCRAS 
400
VENMDDDQTN IGNSSRKKRV SKNPREKVES SSDHSSFVGS VNPSSLYKDQ 
450
LYLPRNFVSS NFLDKRCSEI VLKNERGEKR TLVLKHFKKD LTFLKKGWTS 
500
FCQVNRIKAG DSFKFKLVGT WNKPVLSLCP TETNYHKTPL ACSEGNKSEE 
550
SEEEGTEDKN TSQDCLEVKK RKYWSTCRAS AENIDDDQTN IGNSSKEKRV 
600
KKNPVKKAES SSDHSSFVAN VTASSLNYDR LYLPLSFVSS NGLDKMNGKE 
650
IVLLNEEGLS WKFNLKYNQA GKHTYVRPGW SRFCDANGMS QGQQFTFKLV 
700
QKHGPPVMYL SLSEHRPKSE SSSHRSYFVG SVTASSIKKD KLYLWKSFVS 
750
SNGLDKGCKK IILKNKWGRE WKLVLKHYKS NCFTIIKRGW TSFCQGNGLK 
800
AGDSFKFKLV GTGEKPVLSL CPAESSHEKI PLECPEGIDD VNSLSSNPSS 
850
GDDSSRSEES EEENMEDKNI SQDCLETKKR KYCSSSSYSQ NRFVTLTLTR 
900
SAFQTYKLVS FFNNYASRLS 
950