fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G26780 LOF1, ATMYB117 LATERAL ORGAN FUSION 1, myb domain protein 117 (.1.2)

>AT1G26780.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 391
HindIII A|AGCTT 379, 628
PvuII CAG|CTG 308


Click here to view TAIR data

>AT1G26780.2 length:1080
ATGTTTATAA CGGAAAAACA AGTGTGGATG GATGAGATCG TCGCAAGAAG 
50
AGCTTCTTCT TCTTGGGACT TCCCTTTCAA CGACATTAAT ATTCATCAGC 
100
ATCATCATCG TCACTGCAAC ACAAGTCATG AGTTTGAAAT CTTGAAGAGT 
150
CCTCTTGGAG ATGTAGCGGT TCACGAAGAA GAGAGTAATA ATAATAACCC 
200
TAATTTCAGT AACAGCGAGA GTGGTAAGAA GGAGACAACA GATAGTGGTC 
250
AGTCTTGGTC CTCGTCGTCT TCAAAACCAT CGGTCTTGGG GAGAGGACAT 
300
TGGAGACCAG CTGAAGATGT TAAACTCAAA GAGCTTGTCT CCATTTACGG 
350
CCCACAAAAC TGGAACCTCA TAGCTGAAAA GCTTCAAGGA AGATCTGGGA 
400
AGAGCTGTAG ACTACGATGG TTTAACCAAT TGGACCCGAG GATAAACCGA 
450
AGAGCTTTCA CAGAAGAAGA AGAGGAGAGG CTGATGCAAG CACATAGGCT 
500
TTATGGTAAC AAATGGGCAA TGATTGCGAG GCTTTTCCCT GGTAGAACTG 
550
ATAATTCAGT GAAGAACCAT TGGCATGTTG TCATGGCTCG TAAGTATAGA 
600
GAACACTCTT CTGCTTACCG TAGGAGAAAG CTTATGAGTA ATAATCCACT 
650
TAAACCTCAC CTCACCAATA ATCATCATCC TAACCCTAAC CCTAATTACC 
700
ACTCTTTTAT CTCCACTAAT CATTACTTCG CTCAGCCTTT CCCCGAGTTT 
750
AATTTGACTC ATCACCTGGT TAATAATGCC CCTATCACGA GTGACCATAA 
800
CCAGCTTGTG TTGCCTTTCC ATTGCTTTCA AGGTTATGAG AACAATGAAC 
850
CTCCGATGGT TGTGAGTATG TTTGGCAACC AAATGATGGT CGGCGATAAC 
900
GTTGGTGCCA CGTCAGACGC GTTATGCAAT ATTCCGCACA TTGACCCTAG 
950
TAACCAAGAG AAACCGGAGC CAAATGATGC AATGCATTGG ATCGGAATGG 
1000
ACGCGGTAGA TGAGGAGGTG TTCGAAAAGG CTAAGCAGCA ACCACATTTT 
1050
TTCGATTTTC TTGGCTTGGG GACGGCGTGA 
1100

>AT1G26780.2 longest ORF length:359
MFITEKQVWM DEIVARRASS SWDFPFNDIN IHQHHHRHCN TSHEFEILKS 
50
PLGDVAVHEE ESNNNNPNFS NSESGKKETT DSGQSWSSSS SKPSVLGRGH 
100
WRPAEDVKLK ELVSIYGPQN WNLIAEKLQG RSGKSCRLRW FNQLDPRINR 
150
RAFTEEEEER LMQAHRLYGN KWAMIARLFP GRTDNSVKNH WHVVMARKYR 
200
EHSSAYRRRK LMSNNPLKPH LTNNHHPNPN PNYHSFISTN HYFAQPFPEF 
250
NLTHHLVNNA PITSDHNQLV LPFHCFQGYE NNEPPMVVSM FGNQMMVGDN 
300
VGATSDALCN IPHIDPSNQE KPEPNDAMHW IGMDAVDEEV FEKAKQQPHF 
350
FDFLGLGTA
400