fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G26790 AtDof1,3 Dof-type zinc finger DNA-binding family protein (.1)

>AT1G26790.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 517
BglII A|GATCT 1162
EcoRI G|AATTC 1060
HindIII A|AGCTT 645, 960
HpaI GTT|AAC 463
NcoI C|CATGG 1154
PstI CTGCA|G 1148
StyI C|C[AT][AT]GG 747, 787, 1154


Click here to view TAIR data

>AT1G26790.1 length:1191
ATGTGGCTCT CTCATCTCTT CATGTCCCTC TCTAAGCTGA CGTGTAATTT 
50
CTCCATTTTC TCTGTCTTTA TGGCTTGTGG CTCTATTGGT ATGTCTCAAG 
100
TTAGAGATAC TCCGGTTAAA TTGTTTGGCT GGACAATTAC ACCGGTTTCT 
150
CATGATCCAT ACTCTTCTTC GTCCCATGTT CTTCCTGATT CTTCCTCGTC 
200
TTCCTCGTCT TCTTCTCTAT CACTTCGACC ACACATGATG AATAACCAAT 
250
CTGTTACTGA CAATACAAGT CTTAAGCTGT CATCTAATCT TAACAACGAG 
300
TCAAAAGAAA CATCTGAGAA CAGTGATGAC CAACACAGCG AGATCACAAC 
350
AATTACATCG GAAGAAGAGA AAACAACTGA ACTGAAGAAA CCAGACAAGA 
400
TTCTTCCATG TCCGAGATGC AACAGCGCAG ACACCAAATT CTGTTACTAC 
450
AACAACTACA ACGTTAACCA GCCACGTCAC TTCTGTAGAA AATGCCAGAG 
500
GTATTGGACC GCTGGTGGAT CCATGAGGAT CGTCCCGGTT GGCTCAGGCC 
550
GTCGCAAGAA CAAGGGATGG GTTTCTTCAG ACCAGTACCT GCACATCACT 
600
TCCGAGGATA CTGACAATTA CAATAGCTCC TCAACAAAGA TTCTAAGCTT 
650
CGAGTCTTCG GACTCTTTGG TAACTGAGAG GCCTAAGCAT CAATCAAACG 
700
AAGTGAAGAT AAACGCTGAA CCTGTTTCAC AAGAACCCAA CAACTTCCAA 
750
GGGTTACTTC CTCCCCAAGC ATCCCCTGTT TCGCCTCCTT GGCCTTACCA 
800
ATACCCTCCA AACCCTAGTT TCTACCACAT GCCCGTCTAC TGGGGCTGCG 
850
CGATACCGGT TTGGTCTACC CTCGACACTT CTACATGTCT TGGGAAAAGG 
900
ACAAGAGACG AAACTTCTCA TGAAACTGTT AAAGAGAGTA AAAATGCTTT 
950
TGAGAGAACA AGCTTGCTTT TGGAATCTCA GAGCATCAAA AATGAAACAA 
1000
GTATGGCTAC AAATAACCAT GTGTGGTATC CAGTACCGAT GACCCGCGAG 
1050
AAGACACAAG AATTCAGCTT TTTCAGTAAT GGAGCTGAAA CAAAGAGCAG 
1100
CAACAACAGA TTCGTCCCTG AAACGTATCT TAACCTGCAA GCAAACCCTG 
1150
CAGCCATGGC AAGATCTATG AACTTCAGAG AGAGCATATA A
1200

>AT1G26790.1 longest ORF length:396
MWLSHLFMSL SKLTCNFSIF SVFMACGSIG MSQVRDTPVK LFGWTITPVS 
50
HDPYSSSSHV LPDSSSSSSS SSLSLRPHMM NNQSVTDNTS LKLSSNLNNE 
100
SKETSENSDD QHSEITTITS EEEKTTELKK PDKILPCPRC NSADTKFCYY 
150
NNYNVNQPRH FCRKCQRYWT AGGSMRIVPV GSGRRKNKGW VSSDQYLHIT 
200
SEDTDNYNSS STKILSFESS DSLVTERPKH QSNEVKINAE PVSQEPNNFQ 
250
GLLPPQASPV SPPWPYQYPP NPSFYHMPVY WGCAIPVWST LDTSTCLGKR 
300
TRDETSHETV KESKNAFERT SLLLESQSIK NETSMATNNH VWYPVPMTRE 
350
KTQEFSFFSN GAETKSSNNR FVPETYLNLQ ANPAAMARSM NFRESI
400