fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G26945 KDR, PRE6 KIDARI, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G26945.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, BamHI, BglII, KpnI, NotI, PacI, PvuII, SacI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 1609, 3300
EcoRV GAT|ATC 178, 1644, 1650
HindIII A|AGCTT 3764
HpaI GTT|AAC 261, 6273
NcoI C|CATGG 2838
NdeI CA|TATG 900, 1520, 2414
NheI G|CTAGC 1282
PstI CTGCA|G 6426
SalI G|TCGAC 315
SpeI A|CTAGT 698, 3138, 3449
StyI C|C[AT][AT]GG 816, 2838, 6286


Click here to view TAIR data

>AT1G26945 genomic sequence (4117-4245,4865-5020,) length:6807
taaatcaata gttatgtgaa aataaaatac taactttcta gctatactag 
50
aagacttttg aagtattaga ctcatatatc ctctttgaat caagagcaga 
100
tcatgccact taatgcggtt atagcacaag tctttctcaa acgtagcgat 
150
tgcaaaataa tttagtagaa tctccaagat atcgaaaata tcaaaaagtc 
200
tatcatacat tttaaggatt tgtgtatatc ttattgtaaa atcattagtt 
250
aggaatttag gttaactgtc atttatatta gtaatgtaac cattttttta 
300
ttattatgag actggtcgac tggatatata tacatatatt ttgtgtgtgt 
350
gtgtgtgtgt gaaagagagt ggatatagtt ctttcaaata caaacctctc 
400
accgatcact ctatcagcaa tatatttatt gtacttgaaa tcggtctcga 
450
catgccgaca aattaaaaat atcttatatt cttgaactaa ttgtgtatta 
500
gtaatatatg atttcatcaa tctatattaa aaagaaaaaa aaaaactttt 
550
ctcatcatat atgtggttag tgtagagtca agttcatgcg aaatcaatat 
600
caattattag tatagattta gtataaccta atcatactaa caagtagaac 
650
gcaaatcgga ttcgatctta aggaatcctg atcctaccta catccaaact 
700
agtaatatgt aggccaggaa ggtgccacaa cacacacacg tattcctaca 
750
ataattaacg agtttattaa tactatttaa acaaaattaa gaagattctc 
800
tgcgtgatcc gaagtccaag gacgttgttt agtaataata atctataaat 
850
ctttggaaca tcgtctttac actgttccac aagtaattca atatatgaac 
900
atatgcttcc atcaatgtat aaggactaaa ataatgagtt atgattatta 
950
ttatttttgt aaatggaaga aaaaacagag attgcgagac aacacatgcc 
1000
atgttttaaa atctcgggga tgggttggtt ttatcgttat atgtctttga 
1050
ccgtcaacaa tgtttggctc ctcgatcgtt ttttaacctt ttaacccata 
1100
ctatgaaatg tccgcaacta ctatttactt gtgacatgat aagcatcttc 
1150
acattaaaat cttgatattg gtcggtctag ggtttgccac aaacagataa 
1200
caatttgttg aaaaagttac acttgtttta agaaataata atgtataaga 
1250
aaacaagtgt actctctata gctgagtact agctagctag tagtgtagtc 
1300
agttaattta actttatcaa ttgatattta ttcgaggcat attctttttc 
1350
gaatttctat aaccaaaatt tgtggggggt ttttcatgaa gaatttgtgg 
1400
gttttaatga tgtaatttaa gtcagagaaa acggcataaa actaagagat 
1450
ggggttccta attaatagga aagctactga tctcggactg cgtgtaaggg 
1500
taggtctcat taatagtagc atatgcatgt tttgtattca ctccgccgga 
1550
attaaccgta tcattctctc agcttcctat tcaaattaaa ccttccatgt 
1600
ctccttttga attctgactt ggacgaatca aatagtctaa ttggatatcg 
1650
atatccaatt cctatagtgt ttttgttgtt tattgcttta aatgtgtgtt 
1700
catcaatgta ttttcatgtt acatgtgtct atatatcaat gtatatccga 
1750
atatgaacta tagtagtcgc ttccaattgg atgattcttt tcatagtaat 
1800
ccaagaggtt gatttagttt tttcggtaca agtaatctgt cctgtagctt 
1850
tggggttatt ttcaaacaaa acatgtatac atatatacta atttcaaact 
1900
ttaaagatac caaaccatgc agaatcaaat tatgtcaata caagtcttat 
1950
aaaagacaaa tacatatttt cattatttag cttaaaaaat taagaaaatt 
2000
ttgtaatttt attttgtttt taatgaataa atagatcaat cttgtccttt 
2050
ttatttatgg tcctctgtaa acaatgacag caacgatggc aaataaataa 
2100
agtattcaga agttaaaata cacacatata tatagatcaa gacctatatc 
2150
ttgttgacaa cgaaaacaaa gaaagaagat taatagatca aatccgagtt 
2200
aaagcaaaca tctaccacat aataaatgca atgcaaaatc aacgaactga 
2250
atccaatcga caatcaaatg cctatctctg catctaccac atgctacgta 
2300
ctcaaaatca gatttttatg gaaggtatta aaaaaatcag agttgtcaac 
2350
tgtaattaca tccaaaacat gatccgtaat ttggcttcaa cattttttgg 
2400
tgttttcttg taccatatgt cctacactct tttcatgata tagaccacca 
2450
cactaaagaa aaataataat taatcttata aatgacagtg attttttttc 
2500
ttttcacgat catgtatagg ataacaatca tattattttc aaaaatattt 
2550
ggatgttaca ttacatcaaa ggtcaaacat ggatgtgtga agaacaaact 
2600
tatacatgtt ccaaaaccat tgaatttcca aaaaaaatca atgtaaaagt 
2650
ttgaaagata caaaaaaaat ggtaaaaaag agagaagtga ttaaaaaaag 
2700
ggacaatgaa gtaatacata taacgtgggg atgcaatggt ggtactgaca 
2750
gagagagaag gcaaagaggg acagtttagt ttggcgataa acacacattt 
2800
tgccatttta aaccccactt gatccctctt ctcctttcca tggccctccc 
2850
ctccttttct acgtcccttt cccaattctt attttaattc tttgtttttt 
2900
tctacttgga tgcgttgagc caaaaatgtt gcaatgaatt aattctactt 
2950
ggcccgattt tggaaagctc tgtagctttg tggactgact ttgatttggt 
3000
tttgatttca gagagtgcgg atcaatccat tgttatacgt gtttggattt 
3050
ttttttgggt ttagccaaaa tcgaaccgag tgacttgact taagcatagt 
3100
tgtatttttt attatatata ttttttttgg tcccatcact agtcactgaa 
3150
aacctctaca atatccctta agataggttc taatcgtcgt atcatacgac 
3200
tcgtatgaga cgatacaaac actctttggt aaagtatcac tattggttta 
3250
gcactggatc ttagttattt gatacccttt ctatttagtt tcaaaatttg 
3300
aattctccat gtcacattca ttatacaaac gttttttgtt gaacaaattt 
3350
tacattcatt cataaaaaca aaagaataca ttatcacaaa acatatataa 
3400
taagataaat tattaaatag aattttttta aaatagacat acaataagac 
3450
tagtcgtctg atatagactc tgcacattat acggacttac atttgtaaac 
3500
tccatcaact cttatccatc tattgtttag tcatgttcaa tattgagaaa 
3550
aattaaagga aattaacatg tagcctttaa attttcaata aaggtcgtta 
3600
agttgaagac ttgaagttga tactacacca tgtgaatagc tcgaaagaaa 
3650
gaaggttaag tggaacagga ataagagaaa gagagcaagg aaaaaaactt 
3700
gacgtgggtg agttttacac atataacaat caagaagttg ttctcgtggg 
3750
aaagtaagtt tagaagctta ccaaaaataa acagtatctt tttgtactaa 
3800
gcgactatga aaaaaactga gaacaaataa taataaatat ttgaaagcta 
3850
aagacaccct tattaaagaa acataaccca caccctccct ccatgcactt 
3900
gtctcttctc cttcttattc ttcttcttct tcttcttgat cttctctctc 
3950
ttcataaatt tgcattataa aaacacatcc actttgctcc tccctcttca 
4000
acaccttctt ctccactctc attctctctt tctgacacat taactactta 
4050
tccttcttgc attcttctct ctctctacac ccaaacaaac acacttataa 
4100
tatatcaaga aagaagATGT CTAGCAGAAG ATCATCACGT TCAAGACAGT 
4150
CAGGAAGCTC AAGAATCTCT GACGATCAGA TTTCCGATCT TGTTTCTAAG 
4200
CTCCAACACC TCATCCCTGA ACTTCGCCGC CGCCGTTCTG ACAAGgtata 
4250
cacttcaaaa taacaaattt taatctatct ttcttgcata tacatactta 
4300
ttttgtatac ttgtataact tagcctgcac atggacttag aaagttcaaa 
4350
tgaataggaa ccatatagta tataataact aattaatatg catggtgaaa 
4400
tccaacggcg tgtagacatg tggcctacaa ttaactatac gtagataaag 
4450
taacattaat tcacagcctc atttatgcat atatcttgtt tgttctttga 
4500
atgttttttt gcaattaaat tttacaagtt ggtggtgtgg gactcagttt 
4550
gttcccttcc tacttccacg taccttaact acatgtctcc ccattactct 
4600
tctctaccta tatactcacc ataattctat atatagctga ggaatatgat 
4650
aaataaattg tggccgttta taccgttgtg cacattgaag tggcaatcat 
4700
gagaaaaaac taaagttctg ttaaaagttt gaagatatat atgaaattgt 
4750
tacaaagaaa gaaaaaaggc agtagcacat gttgtcacgt actctttgta 
4800
agggatataa tgatcgtttt ttgtacttta aaactaattg taaaatgttt 
4850
aaactattgg acagGTGTCA GCATCTAAGG TACTACAAGA GACTTGCAAC 
4900
TACATCAGGA ACTTACACAG AGAGGTTGAT GACCTCAGTG ACCGTTTGTC 
4950
GGAACTCTTG GCTTCGACGG ACGACAACAG CGCCGAAGCA GCCATCATTA 
5000
GGAGCTTGCT TAATTATTAA atccgcatta cttaatctga gagctattaa 
5050
tcatccgttt ccggccacca aatttatctt attatgggta tcgtctgttt 
5100
acttctacat catatattat gagatatagc tagggtttcg ggtcattgtt 
5150
aggccaactc atatatttat atttaatata tggttatgta tgtatgtatg 
5200
catgttaatt gtatctgagg gtccagacct ggcgtatagt agcctgtgta 
5250
tcatgagatc ctctaatatt tatgattaat gacacggtcc gtttcctttt 
5300
ttactatact gatctactgt tataagtttc gtttatcata tctttttcta 
5350
taattaacaa gctgaggaga ttatcggtgt atgctcgaaa tttcttagtt 
5400
gaagaaatta agaacaatat atgtgtatgc caaataaata agttatactt 
5450
ggaagtatgt caatacaatt ttatcaaaaa aaataaaatg gtatgtatat 
5500
acaatttaaa aacgtggaga agttgtgtct gaatttaaat tgtttaaaat 
5550
atgatagaaa cagacgaaga cctcgatgtt ttcgaagtcg tttagtttgg 
5600
attatctgtt ttttaatgtt atctgtagta tatggtatgg tcgtgccatt 
5650
ttatttaaat cctcttgcat gtgatcatta atgtgttatc ttcgtcgtgt 
5700
atattataac acgtattgac tcgataatta cggtattagt gtggtgttat 
5750
taatggagta gataatttat gattacgtgt taaaagtaaa atgtattggg 
5800
atataaggtt acataccttt tctttgaaca gagaaattct tgcgcctgaa 
5850
agttaaatat aatcatgtac tgtatcagtt cccgtttttt ttcggtcatt 
5900
gatttttttt ttcgggcaac acattagttg tttttattta tgagcaccaa 
5950
agactaagta gaattttaaa aacatgatga aatattaatt atgacttgaa 
6000
gacatttgaa agtgtgatac atgtttagga gctggtaaca cgtttttaat 
6050
gataatctct caatttagta tagaataaaa tatacatatt ttgtattatt 
6100
ctgacaaatc aaatagtttt gagttatcac aaactctaca agaaacccat 
6150
ctaaattata gtataagaaa atactccgga acgccaacct ttacttaatc 
6200
aaccctaagt tgacgaccca aaaaaaaaat taacctttaa atcatttgaa 
6250
taatggccat aggcccaaat atgttaacaa aagagccttg gcccagttcc 
6300
tggctagact tcctttcatt ttctgttatt ttttttttgg taaaccaacg 
6350
ggagggactg ccgtctttat tcaatagaac caaaaataaa aaaTTACATG 
6400
GGCACATGTC TAGCCCCAGC AACACCTGCA GCATCCTCAC GCATAATCGA 
6450
ATCGACAAAC GGAAGACCTG AGTCAAAAGA AAGAAAGCCT AAAAGTAAAC 
6500
TAAAAGCATA GTTTGCTAAC TCGTCAGCAA AACGGTTAGC TTCCCGATAA 
6550
ACATGCGAAA CTCGGACTAT CCAGTCCTTT GATGAGAAGC CATAGCACAA 
6600
ACGTACTAGG AATGACAACA GATGAGAGTC TTCTATCCCT GTCGTGAGAA 
6650
AACCAGCCAC CAATTTTGAA TCTACCTCAA GCTCCAGCCG CGTTATACCC 
6700
TTCTCCCAAG CTATAACCAA CCCGTAGTAC ACACCCCAAA GCTCTGCTAA 
6750
CGGAGCCGTG CACCGCCCTA AATTCAGGGC AAAACTTCCT CGCCAATCCC 
6800
CGTACTC
6850