| Locus |
Common name |
Short description |
| AT1G26960 |
ATHB23 |
homeobox protein 23 (.1) |
>AT1G26960.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, BaeI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BstAPI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, SwaI, TliI, TspRI, Tth111I, XcmI, XhoI, XmaI
| Name |
Recognition sequence |
Cut positions |
| AflII
| C|TTAAG |
403 |
| AflIII
| A|CPuPyGT |
701 |
| AluI
| AG|CT |
22, 261, 297, 301, 358, 378, 462, 469 |
| ApoI
| Pu|AATTPy |
39, 651 |
| AvrII
| C|CTAGG |
609 |
| BalI
| TGG|CCA |
736 |
| BanII
| GPuGCPy|C |
359 |
| BfaI
| C|TAG |
110, 155, 245, 299, 324, 608 |
| BglII
| A|GATCT |
121 |
| BlpI
| GC|TNAGC |
21 |
| BsaJI
| C|CNNGG |
102, 311, 609, 739 |
| BsaWI
| [AT]|CCGG[AT] |
585 |
| BsiHKAI
| G[AT]GC[AT]|C |
359 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
359 |
| BspDI
| AT|CGAT |
592 |
| BssSI
| C|TCGTG |
305 |
| BstBI
| TT|CGAA |
415 |
| BstYI
| Pu|GATCPy |
121, 193 |
| BtgI
| C|CPuPyGG |
102, 739 |
| Cac8I
| GCN|NGC |
300 |
| ClaI
| AT|CGAT |
592 |
| DdeI
| C|TNAG |
20, 196, 423, 472 |
| DpnI
| GA-CH3|TC |
74, 120, 192, 284, 363, 537, 589 |
| DpnII
| |GATC |
74, 120, 192, 284, 363, 537, 589 |
| EaeI
| Py|GGCCPu |
736 |
| EcoRI
| G|AATTC |
651 |
| Fnu4HI
| GC|NGC |
377 |
| HaeIII
| GG|CC |
579, 611, 735 |
| HindIII
| A|AGCTT |
463 |
| HinfI
| G|ANTC |
279, 507 |
| HpaII
| C|CGG |
584 |
| Hpy188I
| TCN|GA |
183, 282, 424, 518, 647, 660 |
| HpyCH4III
| ACN|GT |
688 |
| HpyCH4IV
| A|CGT |
135 |
| HpyCH4V
| TG|CA |
138, 318, 636 |
| MboI
| |GATC |
74, 120, 192, 284, 363, 537, 589 |
| MfeI
| C|AATTG |
235, 762 |
| MscI
| TGG|CCA |
736 |
| MseI
| T|TAA |
402 |
| MspI
| C|CGG |
584 |
| MwoI
| GCNNNNN|NNGC |
749 |
| NcoI
| C|CATGG |
102, 739 |
| NheI
| G|CTAGC |
300 |
| NlaIII
| CATG| |
101, 226, 397, 540, 700, 738 |
| NlaIV
| GGN|NCC |
344 |
| NspI
| PuCATG|Py |
398, 701 |
| PciI
| A|CATGT |
701 |
| SacI
| GAGCT|C |
359 |
| Sau3AI
| |GATC |
74, 120, 192, 284, 363, 537, 589 |
| SmlI
| C|TPyPuAG |
382, 403 |
| SspI
| AAT|ATT |
179 |
| StyI
| C|C[AT][AT]GG |
102, 311, 609, 739 |
| Taqƒ¿I
| T|CGA |
286, 361, 414, 591 |
| TfiI
| G|A[AT]TC |
279, 507 |
| TseI
| G|C[AT]GC |
377 |
| Tsp45I
| |GT[CG]AC |
547, 571 |
| Tsp509I
| |AATT |
38, 234, 291, 331, 411, 600, 650, 712, 761 |
| XbaI
| T|CTAGA |
156 |
| XmnI
| GAANN|NNTTC |
443 |
Click here to view TAIR data
>AT1G26960.1 length:768
ATGTCTTGTA ATAATAATGG CTTAGCTTTC TTCCCTGAAA ATTTCAGTCT | 50 |
CCAAAACCAT CACCAAGAAG AAGAAGATCA CCCTCAACTT CTTCAAGACT | 100 |
TCCATGGGTT TCTAGGTAAA AGATCTCCAA TGAACAACGT GCAAGGGTTT | 150 |
TGTAATCTAG ATATGAACGG AGATGAAGAA TATTCAGACG ATGGATCTAA | 200 |
GATGGGAGAG AAGAAGAGGA GATTGAACAT GGAACAATTG AAGGCACTAG | 250 |
AGAAGGACTT TGAGCTTGGT AATAAACTTG AATCAGATCG AAAATTAGAG | 300 |
CTAGCTCGTG CCTTGGGATT GCAACCTAGA CAAATTGCTA TATGGTTCCA | 350 |
AAACAGAAGA GCTCGATCCA AAACCAAGCA GCTTGAGAAA GACTATGACA | 400 |
TGCTTAAGCG TCAATTCGAA AGTCTCAGAG ATGAGAACGA AGTTCTTCAA | 450 |
ACTCAAAATC AAAAGCTTCA AGCTCAGGTA ATGGCATTGA AAAGCAGAGA | 500 |
ACCAATAGAA TCAATCAATC TGAACAAAGA AACAGAAGGA TCATGTAGTG | 550 |
ACAGAAGTGA GAACATTTCT GGTGACATCA GGCCACCGGA GATCGATAGC | 600 |
CAATTCGCCC TAGGCCATCC ACCGACAACT ACAACGATGC AGTTTTTTCA | 650 |
GAATTCATCG TCAGAACAGA GAATGGTGAA AGAAGAGAAC AGTATCAGTA | 700 |
ACATGTTCTG TGGAATTGAT GACCAGTCTG GGTTCTGGCC ATGGCTTGAC | 750 |
CAGCAACAAT ACAATTGA | 800 |
>AT1G26960.1 longest ORF length:255
MSCNNNGLAF FPENFSLQNH HQEEEDHPQL LQDFHGFLGK RSPMNNVQGF | 50 |
CNLDMNGDEE YSDDGSKMGE KKRRLNMEQL KALEKDFELG NKLESDRKLE | 100 |
LARALGLQPR QIAIWFQNRR ARSKTKQLEK DYDMLKRQFE SLRDENEVLQ | 150 |
TQNQKLQAQV MALKSREPIE SINLNKETEG SCSDRSENIS GDIRPPEIDS | 200 |
QFALGHPPTT TTMQFFQNSS SEQRMVKEEN SISNMFCGID DQSGFWPWLD | 250 |
QQQYN | 300 |
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