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| Locus | Common name | Short description |
| AT1G27650 | ATU2AF35A | U2 snRNP auxiliary factor small subunit, putative (.1.2) |
>AT1G27650.1 CDS map
>>Show genomic map
Uncut enzymes: Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrGI, BsrI, BssHII, BssSI, BstBI, BstF5I, BstZ17I, Bsu36I, BtrI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoO109I, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspOMI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmlI, SnaBI, SpeI, SphI, SspI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmnI
| Name | Recognition sequence | Cut positions |
| AatII | GACGT|C | 407 |
| AccII(FnuDII) | CG|CG | 99, 210, 446, 686 |
| AciI | C|CGC | 209, 445, 574 |
| AflIII | A|CPuPyGT | 149, 457 |
| AgeI | A|CCGGT | 92 |
| AluI | AG|CT | 261, 367, 519 |
| AlwNI | CAGNNN|CTG | 382 |
| ApoI | Pu|AATTPy | 664 |
| AvaI | C|PyCGPuG | 798 |
| BanII | GPuGCPy|C | 795 |
| BglI | GCCNNNN|NGGC | 802 |
| BsaAI | PyAC|GTPu | 456 |
| BsaHI | GPu|CGPyC | 407 |
| BsaJI | C|CNNGG | 177, 489, 619, 798 |
| BsaWI | [AT]|CCGG[AT] | 92 |
| BsiHKAI | G[AT]GC[AT]|C | 96, 226 |
| BslI | CCNNNNN|NNGG | 460, 786, 804 |
| BsoBI | C|PyCGPuG | 798 |
| Bsp1286I | G[GAT]GC[CAT]|C | 96, 226, 795 |
| BsrDI | GCAATGNN| | 848 |
| BsrFI | Pu|CCGGPy | 92 |
| BssKI | |CCNGG | 177, 619, 797 |
| BstAPI | GCANNNN|NTGC | 383 |
| BstEII | G|GTNACC | 89 |
| BstNI | CC|[AT]GG | 177, 619 |
| BstUI | CG|CG | 99, 210, 446, 686 |
| BstXI | CCANNNNN|NTGG | 324 |
| BstYI | Pu|GATCPy | 249 |
| BtgI | C|CPuPyGG | 489 |
| BtsI | GCAGTGNN| | 724 |
| Cac8I | GCN|NGC | 76, 98, 378, 775 |
| Cfr10I | [AG]|CCGG[TC] | 92 |
| DdeI | C|TNAG | 31, 190, 537 |
| DpnI | GA-CH3|TC | 248, 356, 567, 647, 683 |
| DpnII | |GATC | 248, 356, 567, 647, 683 |
| EcoNI | CCTNN|NNNAGG | 786 |
| EcoRI | G|AATTC | 664 |
| EcoRV | GAT|ATC | 560 |
| Fnu4HI | GC|NGC | 363, 369 |
| HaeII | PuGCGC|Py | 73 |
| HaeIII | GG|CC | 159, 194 |
| HhaI | GCG|C | 72 |
| HinP1I | G|CGC | 72 |
| HincII | GTPy|PuAC | 184 |
| HindIII | A|AGCTT | 520 |
| HinfI | G|ANTC | 218 |
| HpaII | C|CGG | 91, 797 |
| Hpy188I | TCN|GA | 732 |
| Hpy99I | CG[AT]CG| | 642 |
| HpyCH4III | ACN|GT | 112, 487, 499, 697, 751 |
| HpyCH4IV | A|CGT | 330, 406, 455, 643 |
| HpyCH4V | TG|CA | 364, 375, 384, 482, 510 |
| MboI | |GATC | 248, 356, 567, 647, 683 |
| MseI | T|TAA | 345 |
| MslI | CAPyNN|NNPuTG | 514, 707 |
| MspA1I | C[AC]G|C[GT]G | 368 |
| MspI | C|CGG | 91, 797 |
| MwoI | GCNNNNN|NNGC | 369, 383, 518, 802 |
| NciI | CC|[CG]GG | 797 |
| NlaIII | CATG| | 83, 148, 166, 319, 508, 512, 701 |
| NlaIV | GGN|NCC | 794 |
| NruI | TCG|CGA | 687 |
| NsiI | ATGCA|T | 511 |
| NspI | PuCATG|Py | 149, 513 |
| PciI | A|CATGT | 149 |
| PmlI | CAC|GTG | 456 |
| PspGI | |CC[AT]GG | 177, 619 |
| PstI | CTGCA|G | 365 |
| PvuII | CAG|CTG | 368 |
| RsaI | GT|AC | 27, 151, 496 |
| Sau3AI | |GATC | 248, 356, 567, 647, 683 |
| Sau96I | G|GNCC | 194 |
| ScrFI | CC|NGG | 177, 619, 797 |
| SfcI | C|TPuPyAG | 365 |
| SmaI | CCC|GGG | 798 |
| StuI | AGG|CCT | 160 |
| Taqƒ¿I | T|CGA | 204, 527 |
| TfiI | G|A[AT]TC | 218 |
| TseI | G|C[AT]GC | 363, 369 |
| Tsp45I | |GT[CG]AC | 88, 301, 435 |
| Tsp509I | |AATT | 47, 503, 663 |
| TspRI | NNCA[CG]TGNN| | 724 |
| XmaI | C|CCGGG | 798 |
Click here to view TAIR data
>AT1G27650.1 length:891
ATGGCGGAGC ATTTGGCTTC AATCTTTGGT ACTGAGAAAG ACAGAGTGAA | 50 |
TTGCCCTTTC TACTTCAAGA TTGGCGCTTG CCGTCATGGT GACCGGTGCT | 100 |
CGCGTCTTCA CAACCGTCCT ACCATCTCCC CAACACTCCT TCTTTCAAAC | 150 |
ATGTACCAAA GGCCTGACAT GATTACCCCT GGTGTTGACG CTCAGGGCCA | 200 |
ACCACTCGAC CCGCGTAAGA TTCAGGAGCA CTTTGAGGAT TTCTTTGAGG | 250 |
ATCTTTTTGA GGAGCTTGGA AAGTTTGGCG AGATAGAGAG CCTCAACATT | 300 |
TGTGACAACC TTGCTGACCA CATGATTGGC AACGTATATG TTCAGTTTAA | 350 |
GGAAGAGGAT CAGGCTGCAG CTGCTTTGCA GGCTCTGCAA GGTAGGTTCT | 400 |
ATTCAGGACG TCCCATCATT GCTGATTTCT CTCCTGTGAC GGATTTCCGC | 450 |
GAAGCCACGT GTAGGCAGTA TGAAGAAAAC AACTGCAACC GTGGTGGGTA | 500 |
CTGTAATTTC ATGCATGTGA AGCTTGTTTC GAGGGAACTA AGGAGAAAAC | 550 |
TCTTTGGGAG ATATCGGCGA TCATACCGCA GAGGAAGTAG AAGCAGGAGC | 600 |
AGAAGCAGGA GTATTAGCCC CAGGAACAAG AGAGATAATG ACCGACGTGA | 650 |
TCCTTCTCAC AGGGAATTCA GTCATCGGGA CAGAGATCGC GAGTTTTACC | 700 |
GTCATGGAAG TGGAAAAAGG AGCAGTGAGA GGTCGGAGAG GCAAGAGAGG | 750 |
GACGGTTCAA GGGGTAGGAG ACAAGCAAGC CCTAAACGAG GAGGGAGCCC | 800 |
GGGTGGCGGG AGGGAAGGAA GTGAGGAGAG GAGGGCAAGG ATTGAGCAAT | 850 |
GGAACAGAGA ACGGGAGGAG AAGGAAGAGG GAGGAGCATA A | 900 |
>AT1G27650.1 longest ORF length:296
MAEHLASIFG TEKDRVNCPF YFKIGACRHG DRCSRLHNRP TISPTLLLSN | 50 |
MYQRPDMITP GVDAQGQPLD PRKIQEHFED FFEDLFEELG KFGEIESLNI | 100 |
CDNLADHMIG NVYVQFKEED QAAAALQALQ GRFYSGRPII ADFSPVTDFR | 150 |
EATCRQYEEN NCNRGGYCNF MHVKLVSREL RRKLFGRYRR SYRRGSRSRS | 200 |
RSRSISPRNK RDNDRRDPSH REFSHRDRDR EFYRHGSGKR SSERSERQER | 250 |
DGSRGRRQAS PKRGGSPGGG REGSEERRAR IEQWNREREE KEEGGA | 300 |