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| Locus | Common name | Short description |
| AT1G27650 | ATU2AF35A | U2 snRNP auxiliary factor small subunit, putative (.1.2) |
>AT1G27650.2 CDS map
>>Show genomic map
Uncut enzymes: Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstBI, BstEII, BstF5I, BstZ17I, Bsu36I, BtrI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoO109I, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspOMI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmlI, SnaBI, SpeI, SphI, SspI, StyI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmnI
| Name | Recognition sequence | Cut positions |
| AatII | GACGT|C | 257 |
| AccII(FnuDII) | CG|CG | 60, 296, 536 |
| AciI | C|CGC | 59, 295, 424 |
| AflIII | A|CPuPyGT | 307 |
| AluI | AG|CT | 111, 217, 369 |
| AlwNI | CAGNNN|CTG | 232 |
| ApoI | Pu|AATTPy | 514 |
| AvaI | C|PyCGPuG | 648 |
| BanII | GPuGCPy|C | 645 |
| BglI | GCCNNNN|NGGC | 652 |
| BsaAI | PyAC|GTPu | 306 |
| BsaHI | GPu|CGPyC | 257 |
| BsaJI | C|CNNGG | 27, 339, 469, 648 |
| BsiHKAI | G[AT]GC[AT]|C | 76 |
| BslI | CCNNNNN|NNGG | 310, 636, 654 |
| BsoBI | C|PyCGPuG | 648 |
| Bsp1286I | G[GAT]GC[CAT]|C | 76, 645 |
| BsrDI | GCAATGNN| | 698 |
| BssKI | |CCNGG | 27, 469, 647 |
| BstAPI | GCANNNN|NTGC | 233 |
| BstNI | CC|[AT]GG | 27, 469 |
| BstUI | CG|CG | 60, 296, 536 |
| BstXI | CCANNNNN|NTGG | 174 |
| BstYI | Pu|GATCPy | 99 |
| BtgI | C|CPuPyGG | 339 |
| BtsI | GCAGTGNN| | 574 |
| Cac8I | GCN|NGC | 228, 625 |
| DdeI | C|TNAG | 40, 387 |
| DpnI | GA-CH3|TC | 98, 206, 417, 497, 533 |
| DpnII | |GATC | 98, 206, 417, 497, 533 |
| EcoNI | CCTNN|NNNAGG | 636 |
| EcoRI | G|AATTC | 514 |
| EcoRV | GAT|ATC | 410 |
| Fnu4HI | GC|NGC | 213, 219 |
| HaeIII | GG|CC | 9, 44 |
| HincII | GTPy|PuAC | 34 |
| HindIII | A|AGCTT | 370 |
| HinfI | G|ANTC | 68 |
| HpaII | C|CGG | 647 |
| Hpy188I | TCN|GA | 582 |
| Hpy99I | CG[AT]CG| | 492 |
| HpyCH4III | ACN|GT | 337, 349, 547, 601 |
| HpyCH4IV | A|CGT | 180, 256, 305, 493 |
| HpyCH4V | TG|CA | 214, 225, 234, 332, 360 |
| MboI | |GATC | 98, 206, 417, 497, 533 |
| MseI | T|TAA | 195 |
| MslI | CAPyNN|NNPuTG | 364, 557 |
| MspA1I | C[AC]G|C[GT]G | 218 |
| MspI | C|CGG | 647 |
| MwoI | GCNNNNN|NNGC | 219, 233, 368, 652 |
| NciI | CC|[CG]GG | 647 |
| NlaIII | CATG| | 16, 169, 358, 362, 551 |
| NlaIV | GGN|NCC | 644 |
| NruI | TCG|CGA | 537 |
| NsiI | ATGCA|T | 361 |
| NspI | PuCATG|Py | 363 |
| PmlI | CAC|GTG | 306 |
| PspGI | |CC[AT]GG | 27, 469 |
| PstI | CTGCA|G | 215 |
| PvuII | CAG|CTG | 218 |
| RsaI | GT|AC | 1, 346 |
| Sau3AI | |GATC | 98, 206, 417, 497, 533 |
| Sau96I | G|GNCC | 44 |
| ScrFI | CC|NGG | 27, 469, 647 |
| SfcI | C|TPuPyAG | 215 |
| SmaI | CCC|GGG | 648 |
| StuI | AGG|CCT | 10 |
| Taqƒ¿I | T|CGA | 54, 377 |
| TfiI | G|A[AT]TC | 68 |
| TseI | G|C[AT]GC | 213, 219 |
| Tsp45I | |GT[CG]AC | 151, 285 |
| Tsp509I | |AATT | 353, 513 |
| TspRI | NNCA[CG]TGNN| | 574 |
| XmaI | C|CCGGG | 648 |
Click here to view TAIR data
>AT1G27650.2 length:741
ATGTACCAAA GGCCTGACAT GATTACCCCT GGTGTTGACG CTCAGGGCCA | 50 |
ACCACTCGAC CCGCGTAAGA TTCAGGAGCA CTTTGAGGAT TTCTTTGAGG | 100 |
ATCTTTTTGA GGAGCTTGGA AAGTTTGGCG AGATAGAGAG CCTCAACATT | 150 |
TGTGACAACC TTGCTGACCA CATGATTGGC AACGTATATG TTCAGTTTAA | 200 |
GGAAGAGGAT CAGGCTGCAG CTGCTTTGCA GGCTCTGCAA GGTAGGTTCT | 250 |
ATTCAGGACG TCCCATCATT GCTGATTTCT CTCCTGTGAC GGATTTCCGC | 300 |
GAAGCCACGT GTAGGCAGTA TGAAGAAAAC AACTGCAACC GTGGTGGGTA | 350 |
CTGTAATTTC ATGCATGTGA AGCTTGTTTC GAGGGAACTA AGGAGAAAAC | 400 |
TCTTTGGGAG ATATCGGCGA TCATACCGCA GAGGAAGTAG AAGCAGGAGC | 450 |
AGAAGCAGGA GTATTAGCCC CAGGAACAAG AGAGATAATG ACCGACGTGA | 500 |
TCCTTCTCAC AGGGAATTCA GTCATCGGGA CAGAGATCGC GAGTTTTACC | 550 |
GTCATGGAAG TGGAAAAAGG AGCAGTGAGA GGTCGGAGAG GCAAGAGAGG | 600 |
GACGGTTCAA GGGGTAGGAG ACAAGCAAGC CCTAAACGAG GAGGGAGCCC | 650 |
GGGTGGCGGG AGGGAAGGAA GTGAGGAGAG GAGGGCAAGG ATTGAGCAAT | 700 |
GGAACAGAGA ACGGGAGGAG AAGGAAGAGG GAGGAGCATA A | 750 |
>AT1G27650.2 longest ORF length:246
MYQRPDMITP GVDAQGQPLD PRKIQEHFED FFEDLFEELG KFGEIESLNI | 50 |
CDNLADHMIG NVYVQFKEED QAAAALQALQ GRFYSGRPII ADFSPVTDFR | 100 |
EATCRQYEEN NCNRGGYCNF MHVKLVSREL RRKLFGRYRR SYRRGSRSRS | 150 |
RSRSISPRNK RDNDRRDPSH REFSHRDRDR EFYRHGSGKR SSERSERQER | 200 |
DGSRGRRQAS PKRGGSPGGG REGSEERRAR IEQWNREREE KEEGGA | 250 |