Locus |
Common name |
Short description |
AT1G27650 |
ATU2AF35A |
U2 snRNP auxiliary factor small subunit, putative (.1.2) |
>AT1G27650.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
514 |
EcoRV
| GAT|ATC |
410 |
HindIII
| A|AGCTT |
370 |
PstI
| CTGCA|G |
215 |
PvuII
| CAG|CTG |
218 |
SmaI
| CCC|GGG |
648 |
Click here to view TAIR data
>AT1G27650.2 length:741
ATGTACCAAA GGCCTGACAT GATTACCCCT GGTGTTGACG CTCAGGGCCA | 50 |
ACCACTCGAC CCGCGTAAGA TTCAGGAGCA CTTTGAGGAT TTCTTTGAGG | 100 |
ATCTTTTTGA GGAGCTTGGA AAGTTTGGCG AGATAGAGAG CCTCAACATT | 150 |
TGTGACAACC TTGCTGACCA CATGATTGGC AACGTATATG TTCAGTTTAA | 200 |
GGAAGAGGAT CAGGCTGCAG CTGCTTTGCA GGCTCTGCAA GGTAGGTTCT | 250 |
ATTCAGGACG TCCCATCATT GCTGATTTCT CTCCTGTGAC GGATTTCCGC | 300 |
GAAGCCACGT GTAGGCAGTA TGAAGAAAAC AACTGCAACC GTGGTGGGTA | 350 |
CTGTAATTTC ATGCATGTGA AGCTTGTTTC GAGGGAACTA AGGAGAAAAC | 400 |
TCTTTGGGAG ATATCGGCGA TCATACCGCA GAGGAAGTAG AAGCAGGAGC | 450 |
AGAAGCAGGA GTATTAGCCC CAGGAACAAG AGAGATAATG ACCGACGTGA | 500 |
TCCTTCTCAC AGGGAATTCA GTCATCGGGA CAGAGATCGC GAGTTTTACC | 550 |
GTCATGGAAG TGGAAAAAGG AGCAGTGAGA GGTCGGAGAG GCAAGAGAGG | 600 |
GACGGTTCAA GGGGTAGGAG ACAAGCAAGC CCTAAACGAG GAGGGAGCCC | 650 |
GGGTGGCGGG AGGGAAGGAA GTGAGGAGAG GAGGGCAAGG ATTGAGCAAT | 700 |
GGAACAGAGA ACGGGAGGAG AAGGAAGAGG GAGGAGCATA A | 750 |
>AT1G27650.2 longest ORF length:246
MYQRPDMITP GVDAQGQPLD PRKIQEHFED FFEDLFEELG KFGEIESLNI | 50 |
CDNLADHMIG NVYVQFKEED QAAAALQALQ GRFYSGRPII ADFSPVTDFR | 100 |
EATCRQYEEN NCNRGGYCNF MHVKLVSREL RRKLFGRYRR SYRRGSRSRS | 150 |
RSRSISPRNK RDNDRRDPSH REFSHRDRDR EFYRHGSGKR SSERSERQER | 200 |
DGSRGRRQAS PKRGGSPGGG REGSEERRAR IEQWNREREE KEEGGA | 250 |
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